Evidence map›Paper›PMID 41672043›Full record

ArticleImmunity2026

Chromatin-mediated anticipatory control of type I interferon production in plasmacytoid dendritic cells.

Nicholas M Adams, Aleksandra Galitsyna, Ioanna Tiniakou, Eduardo Esteva, Ai C Ra, Simon Ullrich, Stephen T Yeung, Yanjun Tan, Joseph N Pucella, Igor Dolgalev and 5 more

Abstract read
In one paragraph

Article in Immunity, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Nicholas M AdamsDepartment of Pathology, New York University Grossman School of Medicine, New York, NY 10016, USA.
Aleksandra GalitsynaInstitute for Medical Engineering and Science, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Ioanna TiniakouDepartment of Pathology, New York University Grossman School of Medicine, New York, NY 10016, USA.
Eduardo EstevaDepartment of Pathology, New York University Grossman School of Medicine, New York, NY 10016, USA; Applied Bioinformatics Laboratories, New York University Grossman School of Medicine, New York, NY 10016, USA.
Ai C RaApplied Bioinformatics Laboratories, New York University Grossman School of Medicine, New York, NY 10016, USA.
Simon UllrichBiozentrum, Ludwig Maximilians University Munich, 82152, Planegg-Martinsried, Germany.
Stephen T YeungDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY 10016, USA.
Yanjun TanDepartment of Pathology, New York University Grossman School of Medicine, New York, NY 10016, USA.
Joseph N PucellaDepartment of Pathology, New York University Grossman School of Medicine, New York, NY 10016, USA.
Igor DolgalevCellular Analytics Laboratory, New York University Grossman School of Medicine, New York, NY 10016, USA; Department of Medicine, New York University Grossman School of Medicine, New York, NY 10016, USA.
David E LevyDepartment of Pathology, New York University Grossman School of Medicine, New York, NY 10016, USA.
Kamal M KhannaDepartment of Microbiology, New York University Grossman School of Medicine, New York, NY 10016, USA; Perlmutter Cancer Center, New York University Langone Health, New York, NY 10016, USA.
Irina SoloveiBiozentrum, Ludwig Maximilians University Munich, 82152, Planegg-Martinsried, Germany.
Leonid A MirnyInstitute for Medical Engineering and Science, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Department of Physics, Massachusetts Institute of Technology, Cambridge, MA 02139, USA. Electronic address: leonid@mit.edu.
Boris ReizisDepartment of Pathology, New York University Grossman School of Medicine, New York, NY 10016, USA. Electronic address: boris.reizis@bsd.uchicago.edu.

Funding

Molecular Control of Plasmacytoid Dendritic Cell Development and FunctionR37AI072571 · NIAID · UNIVERSITY OF CHICAGO · PI Boris Reizis · 2018 to 2026
$5.3M
Novel lung resident interstitial macrophage subset with distinct localization and polarizationR01AI143861 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KHANNA, KAMAL MOHAN · 2019 to 2023
$3.3M
Chromatin architecture as a regulator of dendritic cell functionR01AI164728 · NIAID · UNIVERSITY OF CHICAGO · PI Boris Reizis · 2022 to 2026
$2.7M
NIAID NIH HHS R01 AI143861NIAID NIH HHS R01 AI164728NIAID NIH HHS R37 AI072571
6 · The paper itself

Abstract

Type I interferons (IFN-I), including IFN-β and multiple IFN-α subtypes, are key antiviral proteins encoded within a single large locus. Here, we studied how the chromatin organization of this locus controls cell-type-specific IFN-I responses. The professional IFN-I-producing plasmacytoid dendritic cells (pDCs) simultaneously induced nearly all IFN-I subtypes across the locus. During pDC differentiation, the IFN-I locus translocated into the active intranuclear chromosomal compartment. It also underwent cohesin-dependent reorganization of its three-dimensional chromatin structure; accordingly, IFN-I production by pDCs was cohesin dependent. The promoters of most IFN-I genes harbored open chromatin peaks specifically in pDCs. The preemptive intranuclear translocation and promoter opening of IFN-I genes in pDCs were mediated by the pDC-enriched transcription factor interferon regulatory factor (IRF)8. Several IRF8- and/or cohesin-binding regulatory regions within the IFN-I locus facilitated IFN-I gene induction in pDCs, as confirmed by single-cell multiome analysis. Thus, the unique IFN-I-producing capacity of pDCs is facilitated by anticipatory chromatin organization imparted by IRF8 and cohesin.

Indexed as

ChromatinDendritic CellsInterferon Type IAnimalsCell Cycle ProteinsCell DifferentiationChromosomal Proteins, Non-HistoneCohesinsGene Expression RegulationInterferon Regulatory Factor-8Interferon Regulatory FactorsMiceMice, Inbred C57BLPromoter Regions, GeneticCell Cycle ProteinsChromatinChromosomal Proteins, Non-HistoneCohesinsInterferon Regulatory Factor-8Interferon Regulatory FactorsInterferon Type IchromatincohesinIRF8plasmacytoid dendritic cellstype I interferon

Identifiers

PMID41672043
PMCPMC12990849

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.