Evidence map›Paper›PMID 41674841›Full record

ArticleResearch square2026

Concurrent Germline-Somatic Alterations and Associations with Cancer Outcomes: A Systematic Review of Concurrent Data Use.

Lipika R Pal, Alejandro A Schäffer, Santiago Avila, Jonathan Wooten, Gisela Butera, Padma Sheila Rajagopal

Abstract readPreprint
In one paragraph

Article in Research square, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Lipika R PalNational Cancer Institute.
Alejandro A SchäfferNational Cancer Institute.
Santiago AvilaNational Cancer Institute.
Jonathan WootenNational Cancer Institute.
Gisela ButeraNational Institutes of Health Library.
Padma Sheila RajagopalNational Cancer Institute.

Funding

Germline-Somatic Interactions and Association with Treatment Response in CancerZIABC012112 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI RAJAGOPAL, PADMA · 2022 to 2025
$513k
Intramural NIH HHS ZIA BC012112
6 · The paper itself

Abstract

Purpose: Despite routine clinical collection of germline and somatic data in patients diagnosed with cancer, little is known about how these data concurrently associate with outcomes. The purpose of this review is to map the landscape of concurrent germline-somatic alterations and their associations with translational and clinical outcomes to identify addressable gaps in reporting and considerations for future research. Design: All studies in patients with cancer published through February 2024 were included that contained both germline and somatic data and associations of concurrent germline and somatic attributes with outcomes (e.g. Results: Of the 8,613 studies screened, 197 met inclusion criteria. The most common concurrent germline-somatic alterations studied with respect to outcomes were germline Conclusions: These findings suggest that planning for concurrent germline-somatic data analysis during the initial design of a translational or clinical study could meaningfully improve current applications in cancer genetics.

Identifiers

PMID41674841
PMCPMC12889823

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.