Evidence map›Paper›PMID 41699059›Full record

ArticleNature immunology2026

Demographic and genetic factors shape the epitope specificity of the human antibody repertoire against viruses.

Axel Olin, Christian Pou, Anthony Jaquaniello, Jack Crook, Ziyang Tan, Maguelonne Roux, Florian Dubois, Bruno Charbit, Dang Liu, Françoise Donnadieu and 14 more

Abstract read
In one paragraph

Article in Nature immunology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Axel OlinHuman Evolutionary Genetics Unit, Institut Pasteur, Université Paris Cité, CNRS UMR 2000, Paris, France.ORCID http://orcid.org/0000-0002-1161-4476
Christian PouDepartment of Women's and Children's Health, Karolinska Institutet, Solna, Sweden.
Anthony JaquanielloHuman Evolutionary Genetics Unit, Institut Pasteur, Université Paris Cité, CNRS UMR 2000, Paris, France.
Jack CrookEvolutionary Genomics of RNA Viruses unit, Institut Pasteur, Université Paris Cité, CNRS UMR 2000, Paris, France.
Ziyang TanDepartment of Women's and Children's Health, Karolinska Institutet, Solna, Sweden.
Maguelonne RouxHuman Evolutionary Genetics Unit, Institut Pasteur, Université Paris Cité, CNRS UMR 2000, Paris, France.
Florian DuboisTranslational Immunology Unit, Institut Pasteur, Université Paris Cité, Paris, France.
Bruno CharbitTranslational Immunology Unit, Institut Pasteur, Université Paris Cité, Paris, France.
Dang LiuHuman Evolutionary Genetics Unit, Institut Pasteur, Université Paris Cité, CNRS UMR 2000, Paris, France.ORCID http://orcid.org/0000-0002-7805-889X
Françoise DonnadieuInfectious Disease Epidemiology and Analytics G5 Unit, Institut Pasteur, Université Paris Cité, INSERM U1347, Paris, France.
Laura GarciaInfectious Disease Epidemiology and Analytics G5 Unit, Institut Pasteur, Université Paris Cité, INSERM U1347, Paris, France.ORCID http://orcid.org/0000-0001-8044-5365
Camille LambertInfectious Disease Epidemiology and Analytics G5 Unit, Institut Pasteur, Université Paris Cité, INSERM U1347, Paris, France.ORCID http://orcid.org/0009-0006-7249-8890
Emma BlochInfectious Disease Epidemiology and Analytics G5 Unit, Institut Pasteur, Université Paris Cité, INSERM U1347, Paris, France.
Emmanuel ClaveInstitut de Recherche Saint Louis, Université Paris Cité, INSERM UMR1342, Paris, France.ORCID http://orcid.org/0000-0001-8217-5039
Itauá Leston AraujoInstitut de Recherche Saint Louis, Université Paris Cité, INSERM UMR1342, Paris, France.
Antoine ToubertInstitut de Recherche Saint Louis, Université Paris Cité, INSERM UMR1342, Paris, France.ORCID http://orcid.org/0000-0002-7308-7317
Maxime RotivalHuman Evolutionary Genetics Unit, Institut Pasteur, Université Paris Cité, CNRS UMR 2000, Paris, France.ORCID http://orcid.org/0000-0003-2519-8044
Etienne Simon-LorièreEvolutionary Genomics of RNA Viruses unit, Institut Pasteur, Université Paris Cité, CNRS UMR 2000, Paris, France.ORCID http://orcid.org/0000-0001-8420-7743
Michael WhiteInfectious Disease Epidemiology and Analytics G5 Unit, Institut Pasteur, Université Paris Cité, INSERM U1347, Paris, France.
Petter BrodinDepartment of Women's and Children's Health, Karolinska Institutet, Solna, Sweden.ORCID http://orcid.org/0000-0002-8103-0046
Darragh DuffyTranslational Immunology Unit, Institut Pasteur, Université Paris Cité, Paris, France.ORCID http://orcid.org/0000-0002-8875-2308
Lluis Quintana-MurciHuman Evolutionary Genetics Unit, Institut Pasteur, Université Paris Cité, CNRS UMR 2000, Paris, France. quintana@pasteur.fr.ORCID http://orcid.org/0000-0003-2429-6320
Etienne PatinHuman Evolutionary Genetics Unit, Institut Pasteur, Université Paris Cité, CNRS UMR 2000, Paris, France. epatin@pasteur.fr.ORCID http://orcid.org/0000-0002-9911-4459
Milieu Intérieur Consortium

Funding

Agence Nationale de la Recherche (French National Research Agency) ANR-10-LABX-69-01Agence Nationale de la Recherche (French National Research Agency) ANR-16-CONV-0005
6 · The paper itself

Abstract

Antibodies are central to immune defenses. Despite advances in understanding the mechanisms of antibody generation, a comprehensive model of how intrinsic and external factors shape human humoral responses to viruses has been lacking. Here we apply phage immunoprecipitation sequencing to investigate the effects of demographic factors-including 108 lifestyle and health-related variables-and genetic variation on antibody reactivity to over 97,000 viral peptides in 1,212 healthy adults. We demonstrate that age, sex and continent of birth extensively affect not only the viruses but also the specific viral epitopes targeted by the antibody repertoire. Notably, we find that antibodies against rapidly evolving epitopes of influenza A virus decrease with age, whereas immunoreactivity to conserved epitopes increases. Furthermore, we identify strong associations between antibodies against 34 viruses and genetic variants at HLA, FUT2, IGH and IGK loci, some of which increase autoimmune disease risk. These findings offer a valuable resource for understanding the factors affecting antibody-mediated immunity, laying the groundwork for optimizing vaccine strategies.

Indexed as

Antibodies, ViralEpitopesAdultAgedAntibody SpecificityFemaleGenetic VariationHumansImmunity, HumoralMaleMiddle AgedYoung AdultAntibodies, ViralEpitopes

Identifiers

PMID41699059
PMCPMC12956577

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.