Evidence map›Paper›PMID 41708604›Full record

ArticleNature communications2026

H pilin cyclisation and pilus biogenesis are promiscuous but electrostatic perturbations impair conjugation efficiency.

Shan He, Naito Ishimoto, Joshua L C Wong, Sophia David, Julia Sanchez-Garrido, Mikhail Bogdanov, Konstantinos Beis, Gad Frankel

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Shan He *Department of Life Sciences, Imperial College London, London, UK.ORCID http://orcid.org/0009-0001-0452-9417
Naito Ishimoto *Department of Life Sciences, Imperial College London, London, UK.ORCID http://orcid.org/0000-0001-8976-8582
Joshua L C Wong *Department of Life Sciences, Imperial College London, London, UK.ORCID http://orcid.org/0000-0001-8437-6731
Sophia DavidCentre for Genomic Pathogen Surveillance, Pandemic Sciences Institute, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0002-0115-0954
Julia Sanchez-GarridoDepartment of Life Sciences, Imperial College London, London, UK.ORCID http://orcid.org/0000-0002-5847-4167
Mikhail BogdanovDepartment of Biochemistry & Molecular Biology, The University of Texas Health Science Center, McGovern Medical School, Houston, TX, USA.ORCID http://orcid.org/0000-0002-7176-8127
Konstantinos BeisDepartment of Life Sciences, Imperial College London, London, UK. kbeis@imperial.ac.uk.ORCID http://orcid.org/0000-0001-5727-4721
Gad FrankelDepartment of Life Sciences, Imperial College London, London, UK. gad.frankel@imperial.ac.uk.ORCID http://orcid.org/0000-0002-0046-1363

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During conjugation, plasmid DNA is transferred from donor to recipient bacteria via the plasmid-encoded mating pilus, formed as thin helical assemblies of polymerised pilin subunits. In the IncHI1 R27 plasmid-encoded pilus, the TrhA pilin undergoes cyclisation (via a peptide bond between Gly1 and Asp69), essential for conjugation. Gly1 and Asp69 are exposed on the pilus surface and conserved in all TrhA pilins in the Plascad database. Substituting Asp69 with Asn, Ala, Gly, or Arg does not prevent cyclisation or pilus formation, which remains structurally indistinguishable from the wild type. Conjugation efficiency of the Asp69 substitutions across multiple recipient species correlates with side chain size, in the order Asp69Asn > Asp69Ala > Asp69Gly. However, Asp69Arg, as well as Asp69Lys and Gly1Lys substitutions abolish conjugation, likely due to the positively charged pilus surface (opposite to the wild-type negative charge) forming unfavourable electrostatic interactions with the recipient outer membrane's inner leaflet, composed solely of zwitterionic phosphatidylethanolamine (PE). Consistently, conjugation is rescued in recipients lacking PE. These findings indicate strong selective pressure to maintain Gly1 and Asp69, as efficient DNA transfer depends on precise electrostatic and steric constraints of the pilus surface.

Indexed as

Conjugation, GeneticFimbriae, BacterialFimbriae ProteinsCyclizationEscherichia coliModels, MolecularPhosphatidylethanolaminesPlasmidsStatic ElectricityFimbriae ProteinsphosphatidylethanolaminePhosphatidylethanolamines

Identifiers

PMID41708604
PMCPMC13031515

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.