Evidence mapPaperPMID 41715215Full record

ArticleInfectious agents and cancer2026

SOX9 and TNFAIP3 dysregulation in HCV-associated HCC after DAA therapy: insights into post-viral oncogenic memory.

Rehab I Moustafa, Sally Farouk, Hassan Elsayed, Hend I Shousha, Maha M Elbrashy, Ahmed M Gabr, Ahmed A Yousif, Ahmed Ramadan, Ayman Yosry, Ashraf O Abdelaziz and 2 more

Abstract read
In one paragraph

Article in Infectious agents and cancer, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Rehab I MoustafaMicrobial Biotechnology Department, Biotechnology Research Institute, National Research Centre, Dokki, Cairo, 12622, Egypt. rehabib_m@yahoo.com.ORCID http://orcid.org/0000-0002-8277-8304
Sally FaroukMicrobial Biotechnology Department, Biotechnology Research Institute, National Research Centre, Dokki, Cairo, 12622, Egypt.
Hassan ElsayedMicrobial Biotechnology Department, Biotechnology Research Institute, National Research Centre, Dokki, Cairo, 12622, Egypt.
Hend I ShoushaEndemic medicine and Hepato-gastroenterology Department, Faculty of Medicine, Cairo University, Cairo, Egypt.
Maha M ElbrashyBiochemistry Department, Biotechnology Research Institute, National Research Centre, Dokki, Cairo, 12622, Egypt.
Ahmed M GabrDepartment of Surgery, Faculty of Medicine, Modern University for Technology and Information, Cairo, Egypt.
Ahmed A YousifHepato-Gastroenterology and Infectious Disease Department, Ahmed Maher Teaching Hospital, Cairo, 11613, Egypt.
Ahmed RamadanEndemic medicine and Hepato-gastroenterology Department, Faculty of Medicine, Cairo University, Cairo, Egypt.
Ayman YosryEndemic medicine and Hepato-gastroenterology Department, Faculty of Medicine, Cairo University, Cairo, Egypt.
Ashraf O AbdelazizEndemic medicine and Hepato-gastroenterology Department, Faculty of Medicine, Cairo University, Cairo, Egypt.
Amr AbdelaalDepartment of Surgery, Faculty of Medicine, Ain Shams University, Cairo, Egypt.
Noha G Bader El DinMicrobial Biotechnology Department, Biotechnology Research Institute, National Research Centre, Dokki, Cairo, 12622, Egypt.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHepatitis C virus (HCV) is a leading cause of chronic liver disease and hepatocellular carcinoma (HCC). Despite the high efficacy of direct-acting antivirals (DAAs) in eradicating HCV, HCC may still develop after sustained virological response (SVR), suggesting that HCV may leave behind lasting epigenetic and immunological alterations that sustain oncogenic risk.

objectivesThis study aimed to investigate the expression profiles of SOX9, TNFAIP3, and FOSL2 in peripheral blood mononuclear cells (PBMCs) and liver tissues from HCV-related HCC patients and to explore, through in silico analyses, their molecular and immunological roles in HCV-driven hepatocarcinogenesis. METHODOLOGY: Gene expression was quantified in PBMCs and liver tissues using RT-qPCR. Receiver operating characteristic (ROC) curve analyses assessed diagnostic potential. In silico analyses evaluated protein-protein interactions, gene-gene networks, epigenetic modifications, and correlations with immune cell infiltration and immunomodulatory molecules using publicly available datasets.

resultsSOX9, TNFAIP3, and FOSL2 were identified as interconnected regulators within NF-κB and TGF-β pathways, enriched in inflammatory and infection-related processes, and epigenetically modulated via promoter hypermethylation and histone remodeling. Their expression strongly correlated with macrophages, T cells, dendritic cells, and key immune modulators. RT-qPCR validation confirmed overexpression of SOX9 and TNFAIP3 in PBMCs and liver tissues from HCV-HCC patients, with PBMC levels closely reflecting tissue expression, and ROC analyses highlighted their potential as non-invasive biomarkers.

conclusionsSOX9 and TNFAIP3 emerge as key mediators linking persistent epigenetic alterations with immune remodeling in HCV-related HCC, and as potential non-invasive biomarkers for evaluation of HCC risk and post-DAA surveillance. CLINICAL TRIAL NUMBER: Not applicable.

Indexed as

FOSL2HCV-induced HCCImmune infiltrationPBMCsSOX9SVRTNFAIP3

Identifiers

PMID41715215
PMCPMC13020310

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.