Evidence mapPaperPMID 41726410Full record

ArticleAMIA ... Annual Symposium proceedings. AMIA Symposium2024

Crowdsourcing-Based Knowledge Graph Construction for Drug Side Effects Using Large Language Models with an Application on Semaglutide.

Zhijie Duan, Kai Wei, Zhaoqian Xue, Jiayan Zhou, Shu Yang, Siyuan Ma, Jin Jin, Lingyao Li

Abstract read
In one paragraph

Article in AMIA ... Annual Symposium proceedings. AMIA Symposium, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Zhijie DuanUniversity of Pennsylvania, Philadelphia, PA.
Kai WeiUniversity of Michigan, Ann Arbor, MI.
Zhaoqian XueGeorgetown University, Washington, DC.
Jiayan ZhouStanford University, Stanford, CA.
Shu YangUniversity of Pennsylvania, Philadelphia, PA.
Siyuan MaVanderbilt University, Nashville, TN.
Jin JinUniversity of Pennsylvania, Philadelphia, PA.
Lingyao LiUniversity of South Florida, Tampa, FL.

Funding

Statistical methods and tools for enhancing polygenic risk prediction and discovery of causal gene pathwaysR35GM157133 · UNIVERSITY OF PENNSYLVANIA · 2025 to 2025
$406k
Multi-ethnic risk prediction for complex human diseases integrating multi-source genetic and non-genetic informationR00HG012223 · UNIVERSITY OF PENNSYLVANIA · 2025 to 2025
$235k
NHGRI NIH HHS R00 HG012223NIGMS NIH HHS R35 GM157133
6 · The paper itself

Abstract

Social media is a rich source of real-world data that captures valuable patient experience information for pharmacovigilance. However, mining data from unstructured and noisy social media content remains a challenging task. We present a systematic framework that leverages large language models (LLMs) to extract medication side effects from social media and organize them into a knowledge graph (KG). We apply this framework to semaglutide for weight loss using data from Reddit. Using the constructed knowledge graph, we perform comprehensive analyses to investigate reported side effects across different semaglutide brands over time. These findings are further validated through comparison with adverse events reported in the FAERS database, providing important patient-centered insights into semaglutide's side effects that complement its safety profile and current knowledge base of semaglutide for both healthcare professionals and patients. Our work demonstrates the feasibility of using LLMs to transform social media data into structured KGs for pharmacovigilance.

Indexed as

CrowdsourcingDrug-Related Side Effects and Adverse ReactionsGlucagon-Like PeptidesHypoglycemic AgentsLarge Language ModelsPharmacovigilanceSocial MediaData MiningHumansSemaglutideGlucagon-Like PeptidesHypoglycemic AgentsSemaglutide

Identifiers

PMID41726410
PMCPMC12919570

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.