Evidence map›Paper›PMID 41727056›Full record

ArticlebioRxiv : the preprint server for biology2026

Cortex-Wide Cellular Imaging in Freely Locomoting Mice Using Cortex Camera Array Microscope (CortexCAM).

Arun Cherkkil, Zoey Viavattine, Vamsy Kota, Kapil Saxena, Daniel Surinach, Ibrahim Oladepo, Jill Juneau, Jia Hu, Skylar M L Fausner, Eunsong Ko and 5 more

Abstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Arun CherkkilDepartment of Mechanical Engineering, University of Minnesota, Minneapolis, MN.
Zoey ViavattineDepartment of Mechanical Engineering, University of Minnesota, Minneapolis, MN.
Vamsy KotaDepartment of Mechanical Engineering, University of Minnesota, Minneapolis, MN.
Kapil SaxenaDepartment of Mechanical Engineering, University of Minnesota, Minneapolis, MN.
Daniel SurinachDepartment of Mechanical Engineering, University of Minnesota, Minneapolis, MN.
Ibrahim OladepoDepartment of Mechanical Engineering, University of Minnesota, Minneapolis, MN.
Jill JuneauKavli Institute, Massachusetts Institute of Technology, Cambridge, MA.
Jia HuDepartment of Mechanical Engineering, University of Minnesota, Minneapolis, MN.
Skylar M L FausnerDepartment of Mechanical Engineering, University of Minnesota, Minneapolis, MN.
Eunsong KoDepartment of Mechanical Engineering, University of Minnesota, Minneapolis, MN.
Shubham PanchalDepartment of Mechanical Engineering, University of Minnesota, Minneapolis, MN.
Sanjana SrivatsaDepartment of Mechanical Engineering, University of Minnesota, Minneapolis, MN.
Malachi R LehmanDepartment of Biomedical Engineering, University of Minnesota.
Roarke HorstmeyerBiomedical Engineering, Duke University, Durham, NC.
Suhasa B KodandaramaiahDepartment of Mechanical Engineering, University of Minnesota, Minneapolis, MN.ORCID 0000-0002-7767-2644

Funding

Viral Innovation CoreP30DA048742 · NIDA · UNIVERSITY OF MINNESOTA · PI Mark John Thomas · 2020 to 2026
$19.0M
Miniaturized head-mounted device for pan-cortical electro-optical activity monitoringR01NS111028 · NINDS · UNIVERSITY OF MINNESOTA · PI KODANDARAMAIAH, SUHASA B, SWISHER, SARAH L · 2019 to 2023
$2.4M
Opto-Crown: Transparent skulls with embedded optics for cortex-wide cellular resolution imaging in freely moving miceRF1NS113287 · NINDS · UNIVERSITY OF MINNESOTA · PI BOYDEN, EDWARD S., KODANDARAMAIAH, SUHASA B · 2019 to 2019
$2.0M
Robot assisted brain-wide neural recordings and comprehensive behavioral monitoring in freely behaving miceRF1NS126044 · NINDS · UNIVERSITY OF MINNESOTA · PI EBNER, TIMOTHY J, KODANDARAMAIAH, SUHASA B · 2022 to 2022
$1.9M
Cerebellum wide imaging of neural activity in freely behaving animalsR21NS143157 · NINDS · UNIVERSITY OF MINNESOTA · PI TIMOTHY J EBNER, Suhasa B Kodandaramaiah · 2025 to 2026
$406k
NIDA NIH HHS P30 DA048742NINDS NIH HHS R01 NS111028NINDS NIH HHS R21 NS143157NINDS NIH HHS RF1 NS113287NINDS NIH HHS RF1 NS126044
6 · The paper itself

Abstract

Understanding single-cell neuronal activity across multiple brain regions in the context of ethologically relevant behaviors is a major goal in systems neuroscience. We have engineered the Cortex Camera Array Microscope (CortexCAM), integrating four miniaturized fluorescence imaging microscopes to simultaneously capture cellular activity from contiguous fields of view spanning over 48 mm

Identifiers

PMID41727056
PMCPMC12918861

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.