Evidence map›Paper›PMID 41727595›Full record

ArticleResearch square2026

Deficient de-S-acylation in aging and CLN1 contributes to lyso-mitochondrial dysfunction, lipid dyshomeostasis, and resultant lipofuscin biogenesis.

Sofia Massaro Tieze, Alexander Esqueda, Rachel McAllister, Matija Lagator, Betül Yücel, Eric Sun, TuKiet T Lam, Nicholas Lockyer, Kallol Gupta, Sreeganga S Chandra

Abstract readPreprint
In one paragraph

Article in Research square, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Sofia Massaro TiezeDepartments of Neurology & Neuroscience, Yale University, New Haven, CT, USA.
Alexander EsquedaDepartments of Neurology & Neuroscience, Yale University, New Haven, CT, USA.
Rachel McAllisterDepartment of Cell Biology, Yale University, New Haven, CT, USA.
Matija LagatorPhoton Science Institute, Department of Chemistry, University of Manchester, Manchester, UK.
Betül YücelDepartments of Neurology & Neuroscience, Yale University, New Haven, CT, USA.
Eric SunYale College, Yale University, New Haven, CT, USA.
TuKiet T LamDepartments of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA.
Nicholas LockyerPhoton Science Institute, Department of Chemistry, University of Manchester, Manchester, UK.
Kallol GuptaDepartment of Cell Biology, Yale University, New Haven, CT, USA.
Sreeganga S ChandraDepartments of Neurology & Neuroscience, Yale University, New Haven, CT, USA.

Funding

Yale Pathology Tissue Services Shared ResourceP30CA016359 · NCI · YALE UNIVERSITY · PI Eric P. Winer · 1985 to 2026
$85.0M
Yale Study Support Suite (YES3): Dashboard and Web Portal Software Supporting Research Workflow through integrated, customizable REDCap External ModulesP30AG021342 · NIA · YALE UNIVERSITY · PI Lauren Ferrante · 2002 to 2026
$37.9M
Yale/NIDA Neuroproteomics Research CenterP30DA018343 · NIDA · YALE UNIVERSITY · PI ANGUS C. NAIRN, Kenneth Robert WILLIAMS · 2004 to 2026
$37.1M
NEUROBIOLOGY OF CORTICAL SYSTEMST32NS007224 · NINDS · YALE UNIVERSITY · PI CARDIN, JESSICA A · 1985 to 2025
$4.6M
Roles of the CSPalpha Chaperone Complex in Presynaptic Maintenance and ANCLR01NS083846 · NINDS · YALE UNIVERSITY · PI CHANDRA, SREEGANGA S · 2014 to 2018
$2.2M
Understanding organization of membrane proteins and lipids through lipid vesicle native mass spectrometryR01GM141192 · NIGMS · YALE UNIVERSITY · PI GUPTA, KALLOL · 2021 to 2025
$1.9M
The Physiological Functions of SynucleinsR01NS064963 · NINDS · YALE UNIVERSITY · PI CHANDRA, SREEGANGA S · 2010 to 2014
$1.6M
Flow cytometer for high-parameter analysesS10OD026996 · OD · YALE UNIVERSITY · PI HABERMAN, ANN M · 2019 to 2019
$596k
6500 QTrap Mass Spectrometer for Yale UniversityS10OD018034 · OD · YALE UNIVERSITY · PI MANE, SHRIKANT M · 2014 to 2014
$514k
Identifying the neuronal substrates of the depalmitoylating enzyme PPT1R21NS094971 · NINDS · YALE UNIVERSITY · PI CHANDRA, SREEGANGA S · 2016 to 2017
$460k
An Ultra-Performance Liquid Chromatography System to Support Metabolomics at Yale UniversityS10OD019967 · OD · YALE UNIVERSITY · PI LAM, TUKIET T · 2015 to 2015
$135k
Molecular characterization of lipofuscin pathology in neuronal ceroid lipofuscinosisF31NS130903 · NINDS · YALE UNIVERSITY · PI TIEZE, SOFIA MASSARO · 2023 to 2024
$82k
NCI NIH HHS P30 CA016359NIA NIH HHS P30 AG021342NIDA NIH HHS P30 DA018343NIGMS NIH HHS R01 GM141192NIH HHS S10 OD018034NIH HHS S10 OD019967NIH HHS S10 OD026996NINDS NIH HHS F31 NS130903NINDS NIH HHS R01 NS064963NINDS NIH HHS R01 NS083846NINDS NIH HHS R21 NS094971NINDS NIH HHS T32 NS007224
6 · The paper itself

Abstract

Lipofuscin is an autofluorescent material that accrues in brain tissues with age and in Neuronal Ceroid Lipofuscinosis (NCL), a neurodegenerative disease with pediatric onset. The distribution, composition, and organellar origin of lipofuscin have remained unclear despite its widespread presence in aged tissues and involvement in neurodegeneration. Here, we elucidate lipofuscin composition in mouse and human brain and report the spatiotemporal dynamics of lipofuscin accumulation in aging and NCL in a murine neuroanatomical atlas. Multimodal mass spectrometry, ultrastructural analyses, and assays of metabolic flux identify a primary role of the lysosomal-mitochondrial axis in the formation of lipofuscin pathology. Dissection of implicated molecular pathways reveals protein S-acylation and unsaturated lipid homeostasis as central processes involved in lipofuscin deposition during aging and NCL.

Indexed as

agingautofluorescenceCLN1lipid homeostasisLipofuscinlysosomal storage disordermitochondria-lysosome axisneurodegenerationNeuronal Ceroid Lipofuscinosispalmitoyl protein thioesterase 1S-acylation

Identifiers

PMID41727595
PMCPMC12919294

What Socratic holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.