Evidence mapPaperPMID 41748635Full record

ArticleScientific data2026

Chromosome-level genome of the bank vole (Clethrionomys glareolus): a resource for eco-evo-disease research.

Silvia Marková, Thomas A White, Jeremy B Searle, Petr Kotlík

Abstract readDataset
In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Silvia MarkováLaboratory of Molecular Ecology, Institute of Animal Physiology and Genetics, Czech Academy of Sciences, Liběchov, Czech Republic. markova@iapg.cas.cz.ORCID http://orcid.org/0000-0002-8396-4651
Thomas A WhiteDepartment of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY, USA.
Jeremy B SearleDepartment of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY, USA.ORCID http://orcid.org/0000-0001-7710-5204
Petr KotlíkLaboratory of Molecular Ecology, Institute of Animal Physiology and Genetics, Czech Academy of Sciences, Liběchov, Czech Republic.ORCID http://orcid.org/0000-0001-9429-0667

Funding

Ministerstvo Školství, Mládeže a Tělovýchovy (Ministry of Education, Youth and Sports) EXCELLENCE CZ.02.1.01/0.0/0.0/15_003/0 000460 OP RDEMinisterstvo Školství, Mládeže a Tělovýchovy (Ministry of Education, Youth and Sports) LUAUS25009
6 · The paper itself

Abstract

The increasing availability of reference genomes for non-traditional model species is enhancing research in ecology and evolution. Here, we present a high-quality chromosome-level genome assembly and annotation for the bank vole Clethrionomys glareolus, an emerging model mammal. The 2.24 Gb assembly is resolved into 28 chromosome-scale scaffolds, consistent with the known karyotype of the species. We predicted 40,393 gene loci, including 21,029 protein-coding genes supported by Swiss-Prot homology. Repetitive elements account for approximately 29% of the genome. The assembly achieves a 90.6% BUSCO score, underscoring its completeness. Compared to previously available fragmented assemblies, this genome enables investigation of genome architecture, selection and structural variation at unprecedented resolution. In particular, this chromosome-level resource supports research into ecological and evolutionary responses to climate variation across space and time. It also holds value for other fields, including developmental biology and studies of immunology and virology, where the bank vole is used as a model for host-pathogen interactions-expanding the relevance of this genomic resource across biological disciplines.

Indexed as

ArvicolinaeChromosomes, MammalianGenomeAnimals

Identifiers

PMID41748635
PMCPMC13057007

What Socratic holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.