Evidence mapPaperPMID 41756902Full record

ArticlebioRxiv : the preprint server for biology2026

Diet-induced chromatin states influence intestinal stem cell memory.

Dominic R Saiz, Yesenia Barrera Millan, Thomas Hartley McDermott, Gabriella Cerna, Swathi Sankar, Fiona Farnsworth, Eric Uher, Gourab Lahiri, Kelly Lintecum, Karla Mullen and 2 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Dominic R SaizArizona State University, School of Life Sciences, Tempe, Arizona, USA.ORCID 0000-0002-9878-7635
Yesenia Barrera MillanArizona State University, School of Life Sciences, Tempe, Arizona, USA.ORCID 0000-0003-4165-8936
Thomas Hartley McDermottArizona State University, School of Life Sciences, Tempe, Arizona, USA.ORCID 0000-0002-8794-4594
Gabriella CernaArizona State University, School of Biological and Health Systems Engineering, Tempe, Arizona, USA.ORCID 0009-0002-9248-7954
Swathi SankarArizona State University, School of Life Sciences, Tempe, Arizona, USA.ORCID 0009-0003-6031-1812
Fiona FarnsworthArizona State University, School of Life Sciences, Tempe, Arizona, USA.ORCID 0009-0001-0904-7329
Eric UherArizona State University, School of Life Sciences, Tempe, Arizona, USA.
Gourab LahiriArizona State University, School of Life Sciences, Tempe, Arizona, USA.ORCID 0009-0004-1492-4543
Kelly LintecumArizona State University, School of Life Sciences, Tempe, Arizona, USA.ORCID 0000-0002-4968-2781
Karla MullenArizona State University, School of Life Sciences, Tempe, Arizona, USA.ORCID 0000-0003-0479-1105
Benjamin B BartelleArizona State University, School of Biological and Health Systems Engineering, Tempe, Arizona, USA.ORCID 0000-0002-5044-369X
Miyeko D ManaArizona State University, School of Life Sciences, Tempe, Arizona, USA.ORCID 0000-0002-5516-4008

Funding

Influence of developmental programming in adult stem cells and cancerR01CA301086 · NCI · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI Miyeko Mana · 2025 to 2026
$1.3M
Metabolic and epigenetic drivers of stem cells in obesity and cancerK22CA241083 · NCI · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI MANA, MIYEKO · 2020 to 2022
$531k
NCI NIH HHS K22 CA241083NCI NIH HHS R01 CA301086
6 · The paper itself

Abstract

Intestinal stem cells (ISCs) integrate dietary cues through a metabolic-transcriptional axis, but whether these mechanisms create a lasting epigenetic memory remains unclear. Here, we investigate diet-induced chromatin adaptations in ISCs using a high-fat Western diet (HFD) mouse model. HFD broadly remodels chromatin accessibility, altering pre-existing open regulatory regions. Many differentially accessible regions (DARs) persist during the differentiation of ISCs into transient amplifying cells (TACs). Notably, HFD-induced DARs are retained following diet normalization despite phenotypic reversibility, and HFD re-exposure enhances ISC self-renewal and adenoma growth compared with naïve HFD exposure. The HFD-induced chromatin changes require

Identifiers

PMID41756902
PMCPMC12934732

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.