Evidence map›Paper›PMID 41794040›Full record

ArticleCell reports. Medicine2026

Integrative CSF profiling identifies disease-specific immune responses in leptomeningeal disease.

Paula Nieto, Svenja Klinsing, Ginevra Caratù, Mareike Dettki, Domenica Marchese, Katharina J Weber, Samuel Morabito, Patricia Lorden, Irene Ruano, Katharina Imkeller and 12 more

Abstract read
In one paragraph

Article in Cell reports. Medicine, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Paula NietoCentro Nacional de Análisis Genómico (CNAG), Barcelona, Spain; Universitat Pompeu Fabra (UPF), Barcelona, Spain.
Svenja KlinsingGoethe University Frankfurt, University Hospital, Dr. Senckenberg Institute of Neurooncology, Frankfurt, Germany; Goethe University Frankfurt, University Hospital, Department of Neurology, Frankfurt, Germany; Goethe University Frankfurt, University Hospital, University Cancer Center (UCT), Frankfurt, Germany.
Ginevra CaratùCentro Nacional de Análisis Genómico (CNAG), Barcelona, Spain.
Mareike DettkiGoethe University Frankfurt, University Hospital, Dr. Senckenberg Institute of Neurooncology, Frankfurt, Germany.
Domenica MarcheseCentro Nacional de Análisis Genómico (CNAG), Barcelona, Spain.
Katharina J WeberGoethe University Frankfurt, University Hospital, University Cancer Center (UCT), Frankfurt, Germany; Goethe University Frankfurt, University Hospital, Institute of Neurology (Edinger-Institute), Frankfurt, Germany; Goethe University Frankfurt, Frankfurt Cancer Institute (FCI), Frankfurt, Germany; German Cancer Research Center (DKFZ) Heidelberg, Germany and German Cancer Consortium (DKTK), Partner Site Frankfurt/Mainz, Frankfurt, Germany.
Samuel MorabitoCentro Nacional de Análisis Genómico (CNAG), Barcelona, Spain.
Patricia LordenCentro Nacional de Análisis Genómico (CNAG), Barcelona, Spain.
Irene RuanoCentro Nacional de Análisis Genómico (CNAG), Barcelona, Spain.
Katharina ImkellerGoethe University Frankfurt, University Hospital, University Cancer Center (UCT), Frankfurt, Germany; Goethe University Frankfurt, University Hospital, Institute of Neurology (Edinger-Institute), Frankfurt, Germany; Goethe University Frankfurt, Frankfurt Cancer Institute (FCI), Frankfurt, Germany; German Cancer Research Center (DKFZ) Heidelberg, Germany and German Cancer Consortium (DKTK), Partner Site Frankfurt/Mainz, Frankfurt, Germany.
M Angels VelascoBiomedical Research Institut Sant Pau (IIB Sant Pau), Barcelona, Spain.
Silvia VidalBiomedical Research Institut Sant Pau (IIB Sant Pau), Barcelona, Spain.
Juan L MeleroOmniscope Inc., Barcelona, Spain.
Philipp EuskirchenCharité - Universitätsmedizin Berlin, corporate member of Freie Universität Berlin und Humboldt Universität zu Berlin, Department of Neuropathology, Berlin, Germany; German Cancer Consortium (DKTK), partner site Berlin, a partnership between DKFZ and Charité - Universitätsmedizin Berlin, Berlin, Germany.
Marcus CzabankaGoethe University Frankfurt, University Hospital, University Cancer Center (UCT), Frankfurt, Germany; Goethe University Frankfurt, Frankfurt Cancer Institute (FCI), Frankfurt, Germany; German Cancer Research Center (DKFZ) Heidelberg, Germany and German Cancer Consortium (DKTK), Partner Site Frankfurt/Mainz, Frankfurt, Germany; Goethe University Frankfurt, University Hospital, Department of Neurosurgery, Frankfurt, Germany.
Karl H PlateGoethe University Frankfurt, University Hospital, University Cancer Center (UCT), Frankfurt, Germany; Goethe University Frankfurt, University Hospital, Institute of Neurology (Edinger-Institute), Frankfurt, Germany; Goethe University Frankfurt, Frankfurt Cancer Institute (FCI), Frankfurt, Germany; German Cancer Research Center (DKFZ) Heidelberg, Germany and German Cancer Consortium (DKTK), Partner Site Frankfurt/Mainz, Frankfurt, Germany.
Patrick N HarterCenter for Neuropathology and Prion Research, Ludwig-Maximilians-Universität München, Munich, Germany.
Anna Pascual-ReguantCentro Nacional de Análisis Genómico (CNAG), Barcelona, Spain.
Joachim P SteinbachGoethe University Frankfurt, University Hospital, Dr. Senckenberg Institute of Neurooncology, Frankfurt, Germany; Goethe University Frankfurt, University Hospital, University Cancer Center (UCT), Frankfurt, Germany; Goethe University Frankfurt, Frankfurt Cancer Institute (FCI), Frankfurt, Germany; German Cancer Research Center (DKFZ) Heidelberg, Germany and German Cancer Consortium (DKTK), Partner Site Frankfurt/Mainz, Frankfurt, Germany.
Holger HeynCentro Nacional de Análisis Genómico (CNAG), Barcelona, Spain; University of Barcelona (UB), Barcelona, Spain; ICREA, Barcelona, Spain. Electronic address: holger.heyn@cnag.eu.
Pia S ZeinerGoethe University Frankfurt, University Hospital, Dr. Senckenberg Institute of Neurooncology, Frankfurt, Germany; Goethe University Frankfurt, University Hospital, Department of Neurology, Frankfurt, Germany; Goethe University Frankfurt, University Hospital, University Cancer Center (UCT), Frankfurt, Germany; Goethe University Frankfurt, Frankfurt Cancer Institute (FCI), Frankfurt, Germany; German Cancer Research Center (DKFZ) Heidelberg, Germany and German Cancer Consortium (DKTK), Partner Site Frankfurt/Mainz, Frankfurt, Germany. Electronic address: zeiner@med.uni-frankfurt.de.
Juan C NietoCentro Nacional de Análisis Genómico (CNAG), Barcelona, Spain. Electronic address: juan.nieto@cnag.eu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Leptomeningeal disease (LMD) is a devastating manifestation of advanced cancer, marked by rapid neurological decline and limited treatment options. Immune profiling in central nervous system (CNS) neoplasms, including LMD, is critical for understanding disease biology and guiding therapy. Here, we use single-cell RNA and T cell receptor (TCR) sequencing of cerebrospinal fluid (CSF) from patients with CNS lymphoma (CNSL), brain metastases (BrMs), and glioblastoma (GB), alongside deep TCR sequencing of blood and spatial transcriptomics of brain lesions. We uncover distinct, disease-specific CSF immune landscapes: CNSL-associated LMD shows clonal T cell expansion, while BrMs and GB are enriched in blood-derived and resident-like myeloid cells. Spatial analysis confirms transcriptional similarities between CSF and tumor microenvironments. Longitudinal sampling reveals dynamic immune changes and emerging resistant clones. These findings establish the CSF as an immune-active compartment reflecting disease-specific features and highlight the value of CSF liquid biopsy for immune monitoring and therapeutic stratification in LMD.

Indexed as

Brain NeoplasmsGlioblastomaMeningeal NeoplasmsFemaleHumansLymphomaMaleReceptors, Antigen, T-CellT-LymphocytesTumor MicroenvironmentReceptors, Antigen, T-Cellbrain metastasicerebrospinal fluidCNS lymphomaglioblastomaleptomeningeal diseaseliquid biopsysingle-cell RNA sequencingT cell receptor sequencingtumor immune microenvironment

Identifiers

PMID41794040
PMCPMC13006398

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.