Evidence map›Paper›PMID 41814962›Full record

ArticleJournal of chemical information and modeling2026

Molecular Dynamics Simulations Provide Further Insights into the Allosteric Regulation of the Kinesin-5 Motor Domain by Loop 5.

Gabriel Rodríguez-Santos, Giorgio Bonollo, Cristiano Sciva, Giorgio Colombo, Concepción Pérez-Melero, Stefano A Serapian

Abstract read
In one paragraph

Article in Journal of chemical information and modeling, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Gabriel Rodríguez-SantosPharmaceutical Sciences Department, Pharmaceutical Chemistry Unit, University of Salamanca, Biomedical Research Institute of Salamanca (IBSAL), C/Licenciado Méndez Nieto s/n, Salamanca 37007, Spain.
Giorgio BonolloChemistry Department, University of Pavia, via Torquato Taramelli 12, Pavia 27100, Italy.
Cristiano ScivaChemistry Department, University of Pavia, via Torquato Taramelli 12, Pavia 27100, Italy.
Giorgio ColomboChemistry Department, University of Pavia, via Torquato Taramelli 12, Pavia 27100, Italy.ORCID 0000-0002-1318-668X
Concepción Pérez-MeleroPharmaceutical Sciences Department, Pharmaceutical Chemistry Unit, University of Salamanca, Biomedical Research Institute of Salamanca (IBSAL), C/Licenciado Méndez Nieto s/n, Salamanca 37007, Spain.ORCID 0000-0002-6791-7927
Stefano A SerapianChemistry Department, University of Pavia, via Torquato Taramelli 12, Pavia 27100, Italy.ORCID 0000-0003-0122-8499

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human kinesin-5 is a protein that oversees the proper formation of the bipolar mitotic spindle and is thus an appealing target for cancer treatment. The main group of kinesin-5 inhibitors reported to date binds to an allosteric pocket formed by loop 5 (L5), which is a key structural element believed to allosterically modulate kinesin-5 functionality. In this study, we carried out extensive molecular dynamics (MD) simulations on the motor domain of kinesin-5 in four representative catalytic states: ATP-bound, ADP-bound, without nucleotide (apo), and dually bound by ADP and the known main group inhibitor filanesib. MD trajectories were analyzed using the

Indexed as

KinesinsMolecular Dynamics SimulationAdenosine DiphosphateAdenosine TriphosphateAllosteric RegulationBinding SitesHumansProtein BindingProtein DomainsThionesAdenosine DiphosphateAdenosine TriphosphateKIF11 protein, humanKinesinsThiones

Identifiers

PMID41814962
PMCPMC13080997

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.