Evidence map›Paper›PMID 41826481›Full record

ArticleCommunications biology2026

Impaired cohesin loading disrupts pancreatic differentiation by Polycomb-driven chromatin rewiring and loop collapse.

Longtao Yu, Yayu Liu, Jie Zhang, Chaofan Huang, Huanyu Feng, XueXue Zhao, Shiyu Feng, Wenqian Gong, Xiaowen Lyu

Abstract read
In one paragraph

Article in Communications biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Longtao YuState Key Laboratory of Cellular Stress Biology, Fujian Provincial Key Laboratory of Reproductive Health Research, School of Medicine, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen, China.
Yayu LiuState Key Laboratory of Cellular Stress Biology, Fujian Provincial Key Laboratory of Reproductive Health Research, School of Medicine, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen, China.
Jie ZhangState Key Laboratory of Cellular Stress Biology, Fujian Provincial Key Laboratory of Reproductive Health Research, School of Medicine, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen, China.
Chaofan HuangState Key Laboratory of Cellular Stress Biology, Fujian Provincial Key Laboratory of Reproductive Health Research, School of Medicine, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen, China.
Huanyu FengState Key Laboratory of Cellular Stress Biology, Fujian Provincial Key Laboratory of Reproductive Health Research, School of Medicine, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen, China.
XueXue ZhaoState Key Laboratory of Cellular Stress Biology, Fujian Provincial Key Laboratory of Reproductive Health Research, School of Medicine, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen, China.
Shiyu FengState Key Laboratory of Cellular Stress Biology, Fujian Provincial Key Laboratory of Reproductive Health Research, School of Medicine, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen, China.
Wenqian GongState Key Laboratory of Cellular Stress Biology, Fujian Provincial Key Laboratory of Reproductive Health Research, School of Medicine, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen, China.
Xiaowen LyuState Key Laboratory of Cellular Stress Biology, Fujian Provincial Key Laboratory of Reproductive Health Research, School of Medicine, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen, China. xiaowenlyu@xmu.edu.cn.ORCID http://orcid.org/0000-0002-8317-1141

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cell differentiation is a complex process characterized by specific gene expression patterns regulated through enhancer-promoter interactions within the three-dimensional architecture of the nucleus. The precise role of cohesin loading dynamics in restructuring chromatin during pancreatic lineage commitment remains unclear. Here we show that knockdown of cohesin loader NIPBL disrupts enhancer-promoter interactions and CTCF-mediated loops, leading to widespread transcriptional dysregulation. Furthermore, the loss of cohesin-mediated loops is accompanied by increased contacts between Polycomb Repressive Complex (PRC) domains, highlighting the interplay between cohesin dynamics and PRC-mediated compartmentalization. Although RAD21 and SA1 cohesin levels remain stable at CTCF loop anchors, NIPBL is essential for maintaining long-range chromatin interactions at later differentiation stages. These findings establish cohesin loading as a critical regulator of 3D genome reorganization during cell fate determination, providing a mechanistic framework for understanding cohesinopathy-related developmental disorders.

Indexed as

Cell DifferentiationCohesinsPancreasAnimalsCCCTC-Binding FactorCell Cycle ProteinsEmbryonic Stem CellsEnhancer Elements, GeneticGene Knockdown TechniquesHumansPolycomb-Group ProteinsPromoter Regions, GeneticCCCTC-Binding FactorCell Cycle ProteinsCohesinsNIPBL protein, humanPolycomb-Group Proteins

Identifiers

PMID41826481
PMCPMC13125255

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.