Evidence map›Paper›PMID 41837293›Full record

Trial reportThe Journal of clinical investigation2026

Short-term sleep restriction in humans alters diurnal circulating metabolite profiles, including those of microbial origin.

Vanessa A Leone, Katya Frazier, Manpreet Kaur, Evan A Chrisler, Ashley M Sidebottom, Ethan Tai, ViLinh Tran, Shuzhao Li, Eugene B Chang, Dean P Jones and 2 more

Abstract readRandomized Controlled Trial
In one paragraph

Trial report in The Journal of clinical investigation, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Vanessa A LeoneDepartment of Animal & Dairy Sciences, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Katya FrazierDepartment of Medicine and.
Manpreet KaurDepartment of Animal & Dairy Sciences, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Evan A ChrislerDepartment of Animal & Dairy Sciences, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Ashley M SidebottomDepartment of Medicine and.
Ethan TaiDepartment of Medicine and.
ViLinh TranDepartment of Medicine, Emory University, Atlanta, Georgia, USA.
Shuzhao LiThe Jackson Laboratory for Genomic Medicine, The Jackson Laboratory, Farmington, Connecticut, USA.
Eugene B ChangDepartment of Medicine and.
Dean P JonesDepartment of Medicine, Emory University, Atlanta, Georgia, USA.
Eve Van CauterDepartment of Medicine and.
Erin C HanlonDepartment of Medicine and.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUNDGut microbes and their metabolites contribute to the host circulating metabolome and exhibit diurnal variation influenced by sleep-wake cycles and meal timing. Sleep deprivation alters the rhythmic circulating metabolome, but its impact on microbial metabolites remains unclear. We tested whether 24-hour circulating metabolite profiles, including those of microbial origin, differ under normal (habitual) versus short-term restricted sleep.METHODSIn a randomized crossover design, 9 healthy adults completed 2 in-lab 24-hour blood sampling sessions (q120): one following 3 nights of normal sleep (8.5 hours/night), the other following 3 nights of sleep restriction (4.5 hours/night). Meal timing and caloric intake were held constant. Serum metabolites were characterized using untargeted reverse-phase liquid chromatography-mass spectrometry and rhythmicity was assessed using empirical JTK_CYCLE analysis.RESULTSWe identified 90 metabolites, including 14 of microbial origin or derived from host metabolism of microbial products, e.g., butyrate and tryptophan derivatives. Sleep restriction significantly altered serum metabolite composition compared with normal sleep. While many compounds maintained rhythmicity across conditions, sleep restriction disrupted rhythms of several key compounds, including microbe-derived metabolites. Notably, butyrate and indole-3-propionic acid lost rhythmicity, whereas new rhythms emerged in the tryptophan catabolite, kynurenine, and lipid metabolism intermediates.CONCLUSIONWe provide evidence that microbial metabolites are detectable in human blood and exhibit sleep-dependent rhythmicity. Sleep restriction alters diurnal circulating microbial and host-derived metabolite rhythms even under constant meal timing, composition, and calories. These findings support links between host sleep patterns and gut microbial metabolism and suggest microbial metabolites as potential biomarkers or mediators of sleep loss-associated health risks.TRIAL REGISTRATIONNCT00989976.FUNDINGNIH/NCRR KL2RR025000; R56DK102872-01A1, P30DK020595; P30DK042086; K01DK111785; F31DK122714; DOD W81XWH-07-2-0071.

Indexed as

Circadian RhythmGastrointestinal MicrobiomeMetabolomeSleep DeprivationAdultCross-Over StudiesFemaleHumansMaleYoung AdultBehaviorEndocrinologyMetabolismMicrobiology

Identifiers

PMID41837293
PMCPMC12987657

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.