Evidence mapPaperPMID 41845219Full record

ArticleBMC microbiology2026

Multi-omics analysis reveals the critical role of gut microbiota related tryptophan and glutathione metabolism in sepsis-associated encephalopathy.

Xiaomin Hu, Chao Gong, Siqi Sun, Yanxia Gao, Xin Lu, Shiyuan Yu, Mubing Qin, Huadong Zhu, Yi Li

Abstract read
In one paragraph

Article in BMC microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Xiaomin Hu *State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, 100730, China.
Chao Gong *Emergency Department, The State Key Laboratory for Complex, Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing, 100730, China.
Siqi Sun *State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, 100730, China.
Yanxia GaoEmergency Department, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, 450052, China.
Xin LuEmergency Department, The State Key Laboratory for Complex, Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing, 100730, China.
Shiyuan YuEmergency Department, The State Key Laboratory for Complex, Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing, 100730, China.
Mubing QinEmergency Department, The State Key Laboratory for Complex, Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing, 100730, China.
Huadong ZhuEmergency Department, The State Key Laboratory for Complex, Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing, 100730, China.
Yi LiEmergency Department, The State Key Laboratory for Complex, Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Science and Peking Union Medical College, Beijing, 100730, China. billliyi@126.com.

Funding

Beijing Nova Program 20220484031Chinese Academy of Medical Science Innovation Fund for Medical Sciences (CIFMS) 2021-I2M-1-020Chinese Natural Science Foundation 82270405National High Level Hospital Clinical Research Funding 2022-PUMCH-B-109Peking Union Medical College Hospital Talent Cultivation Program Category C UBJ11751
6 · The paper itself

Abstract

backgroundRecent studies highlight the critical role of gut microbiota in sepsis pathogenesis and its potential link to neurological disorders, particularly sepsis-associated encephalopathy (SAE). However, the exact relationship between gut microbiota, their metabolites, and SAE’s etiology and progression remains enigmatic. We aimed to elucidate how gut bacteria, fungi, and their metabolites contribute to the development and progression of SAE.

methodsThis study was a prospective cohort study. Patients who met the criteria for sepsis 3.0 were included and were divided into SAE and non-SAE groups according to the presence or absence of SAE. Baseline characteristics were collected and mortality was followed up for 28 days. We conducted 16 S and ITS rRNA sequencing of rectal swabs, fecal and plasma metabolomic analysis in septic patients with and without SAE to identify differential bacteria, fungi and microbiota-related metabolites. And we identified potential biomarkers of bacteria and fungi through LEfSe analysis. Differential metabolites were screened and their sources were identified using MetOrigin, followed by identification of KEGG pathways related to gut microbiota, host, and co-metabolism that might play important roles in SAE. Lastly, correlation analysis was performed among differential bacteria, fungi, gut metabolites, plasma metabolites and clinical indicators and we revealed vital flora and metabolites.

resultsThe study included 42 SAE patients, 129 non-SAE patients, and 35 age-matched healthy volunteers. The 28-day mortality rate of SAE patients was higher than that of non-SAE patients (28.57% vs. 10.08%, P = 0.003), and most baseline characteristics were not statistically different. We identified several pivotal bacteria (Klebsiella_pneumoniae_KP3-S and Prevotella_corporis_DSM_18810_=_JCM_8529) and key fungi (Candida_tropicalis_SH1644546.08FU and Dipodascus_geotrichum_SH1157741.08FU). Additionally, we have uncovered the significance of key microbiota-derived metabolites, particularly cysteinylglycine and tryptophan metabolic products, in SAE pathogenesis. Through comprehensive multi-omics analysis, we revealed the potentially critical role of gut microbiota-related tryptophan and glutathione metabolic pathways in SAE development.

conclusionsGut microbiota’s tryptophan and glutathione metabolism may be important to SAE pathogenesis. Our findings deepen understanding of SAE’s pathological mechanisms, providing insights for future research and therapeutic development. CLINICAL TRIAL NUMBER: Not applicable.

Indexed as

Gastrointestinal MicrobiomeGlutathioneSepsis-Associated EncephalopathyTryptophanAgedBacteriaBiomarkersFecesFemaleFungiHumansMaleMetabolomicsMiddle AgedMultiomicsProspective StudiesBiomarkersGlutathioneRNA, Ribosomal, 16STryptophanGlutathione metabolismGut microbiotaSepsisSepsis-associated encephalopathyTryptophan metabolism

Identifiers

PMID41845219
PMCPMC13130485

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.