Evidence map›Paper›PMID 41853535›Full record

ArticleFrontiers in microbiomes2024

Microbial community differentiation in vent chimneys of the Lost City Hydrothermal Field reflects habitat heterogeneity.

Osama M Alian, William J Brazelton, Karmina A Aquino, Katrina I Twing, H Lizethe Pendleton, Gretchen Früh-Green, Susan Q Lang, Matthew O Schrenk

Abstract read
In one paragraph

Article in Frontiers in microbiomes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Osama M AlianDepartment of Microbiology, Genetics, and Immunology, Michigan State University, East Lansing, MI, United States.
William J BrazeltonSchool of Biological Sciences, University of Utah, Salt Lake City, UT, United States.
Karmina A AquinoDepartment of Science and Technology - Philippine Nuclear Research Institute, Quezon City, Philippines.
Katrina I TwingDepartment of Microbiology, Weber State University, Ogden, UT, United States.
H Lizethe PendletonSchool of Biological Sciences, University of Utah, Salt Lake City, UT, United States.
Gretchen Früh-GreenDepartment of Earth Sciences, Eidgenössiche Technische Hochschule Zürich, Zürich, Switzerland.
Susan Q LangDepartment of Geology and Geophysics, Woods Hole Oceanographic Institution, Woods Hole, MA, United States.
Matthew O SchrenkDepartment of Microbiology, Genetics, and Immunology, Michigan State University, East Lansing, MI, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oceanic hydrothermal vent systems represent some of the oldest habitats on Earth and serve as analogs for extraterrestrial environments. The Lost City Hydrothermal Field (LCHF) near the Mid-Atlantic Ridge is one such environment, and its large chimneys are unique in hosting actively venting hydrothermal fluids that are primarily controlled by serpentinization reactions in the subseafloor. Microbial communities within LCHF have been studied for insights into their functional adaptations to the warm, alkaline, and dissolved inorganic carbon-limited environment. Metagenomic and mineralogical data collected during a recent expedition to Lost City were analyzed to delineate associations between microbial populations and physical, chemical and biological characteristics of the chimneys. Bacterial 16S rRNA gene sequences show a high degree of putative microdiversity within the relatively dominant genera Desulfotomaculum, Sulfurovum, Thiomicrorhabdus, and Serpentinicella, which represent a large core of the overall LCHF vent bacterial community. This microdiversity relates to the compositional fraction of aragonite, brucite, and calcite minerals within chimney samples rather than just the composition of nearby vent fluids. Although many species are found in both chimneys and venting fluids, the overall microbial community structures in chimney biofilms remain distinct from the hydrothermal fluids that flow through them. Shotgun metagenomic analyses reveal differences among genes predicted to be involved in carbon, methane, nitrogen and sulfur cycling with respect to their correlations to the abundances of specific minerals. These data hint at microenvironmental complexity lost within standard bulk analyses. The findings of this study underscore the need to more closely examine microbe-mineral interactions in natural environments, critically informing not just population-level distributions, but also the functional underpinnings of these extremophile microbial communities.

Indexed as

correlationsextremophilegeomicrobiologyhydrothermal ventLost City Hydrothermal Fieldmicrobe-rock interactions

Identifiers

PMID41853535
PMCPMC12993503

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.