Evidence map›Paper›PMID 41888780›Full record

ArticleMicrobial cell factories2026

Dual beneficial activities of Paenibacillus ottowii NPDY10: glyphosate degradation, modulation of soil microbial communities, and antagonism against phytopathogenic fungi.

Yun Deng, Yuqing Niu, Qing Xu, DongRong Xie, Yan Su, DuanHua Liu, Yong-He Chen, YongHe Han, Dagang Tian

Abstract read
In one paragraph

Article in Microbial cell factories, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yun DengNanping Institute of Agricultural Sciences, Nanping, 354200, Fujian, China.
Yuqing NiuBiotechnology Research Institute, Crop Research Institute, Fujian Academy of Agricultural Sciences, Fuzhou, 350003, Fujian, China.
Qing XuNanping Institute of Agricultural Sciences, Nanping, 354200, Fujian, China.
DongRong XieNanping Institute of Agricultural Sciences, Nanping, 354200, Fujian, China.
Yan SuNanping Institute of Agricultural Sciences, Nanping, 354200, Fujian, China.
DuanHua LiuNanping Institute of Agricultural Sciences, Nanping, 354200, Fujian, China.
Yong-He ChenNanping Institute of Agricultural Sciences, Nanping, 354200, Fujian, China.
YongHe HanFujian Key Laboratory of Pollution Control and Resource Reuse, College of Environmental and Resource Sciences, Fujian Normal University, Fuzhou, 350117, Fujian, China.
Dagang TianBiotechnology Research Institute, Crop Research Institute, Fujian Academy of Agricultural Sciences, Fuzhou, 350003, Fujian, China. tdg@fjage.org.

Funding

External cooperation projects of FAAS DWHZ2024-07Natural Science Foundation of Fujian Province, China 2022J02010public welfare research institute project 2025R1025003Special Fund for the Construction of Agricultural Science Institutes in Prefectural Cities under the Fujian Province Science and Technology Program 2024N0046the National Natural Science Foundation of China U23A20178
6 · The paper itself

Abstract

backgroundThe widespread use and environmental persistence of the herbicide glyphosate raise significant concerns for human and ecological health. Developing efficient and sustainable remediation strategies is therefore crucial. Microbial degradation and biocontrol are two promising approaches. This study aimed to isolate and characterize a bacterial strain capable of both degrading glyphosate and antagonizing soil-borne fungal pathogens, and to evaluate its impact on soil microbial communities.

resultsThis study isolated and characterized a novel bacterial strain, NPDY10, identified as Paenibacillus ottowii, which exhibits dual beneficial functions: efficient glyphosate degradation and broad-spectrum antagonism against soil-borne fungal pathogens. Under optimal conditions (pH 7-7.5, 30-35 °C), strain NPDY10 completely degraded 400 mg L⁻¹ of glyphosate within four days, utilizing the herbicide as a carbon source. Metabolic profiling via UPLC-MS/MS confirmed glyphosate degradation via the aminomethylphosphonic acid (AMPA) pathway In a rice paddy field trial, the application of NPDY10 reduced glyphosate levels in paddy water, and a visible foam layer formed, serving as a visual indicator of active metabolism. Furthermore, strain NPDY10 demonstrated broad-spectrum antifungal activity in vitro, inhibiting 17 plant-pathogenic fungi with inhibition rates ranging from 60.00% to 92.00%. Analysis of soil microbial communities in a subsequent maize cultivation season revealed that NPDY10 treatment increased bacterial diversity and suppressed the relative abundance of pathogenic fungal genera such as Fusarium and Gibberella.

conclusionPaenibacillus ottowii NPDY10 represents a promising multi-functional agent for sustainable agriculture, potentially combining glyphosate bioremediation with direct and indirect biocontrol effects through modulation of soil microbial communities, thereby contributing to improved soil health.

Indexed as

FungiGlycineHerbicidesPaenibacillusSoil MicrobiologyBiodegradation, EnvironmentalGlyphosateGlycineGlyphosateHerbicidesAntifungal activityBioremediationGlyphosate degradationMicrobial communityPaenibacillus ottowiiSustainable agriculture

Identifiers

PMID41888780
PMCPMC13141297

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.