Evidence map›Paper›PMID 41909912›Full record

ArticleGut microbes reports2025

Actively expressed microbiota in mucosal biopsies of treatment-naïve ulcerative colitis patients.

Line Strand Karlsholm, Rafi Ahmad, Hagar Taman, Christopher G Fenton, Ruth H Paulssen

Abstract read
In one paragraph

Article in Gut microbes reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Line Strand KarlsholmClinical Bioinformatics Research Group, Department of Clinical Medicine, Faculty of Health Sciences, UiT- The Arctic University of Norway, Tromsø, Norway.
Rafi AhmadGenomics Support Centre Tromsø, UiT- The Arctic University of Norway, Department of Clinical Medicine, Faculty of Health Sciences, UiT- The Arctic University of Norway, Tromsø, Norway.ORCID https://orcid.org/0000-0002-0383-7848
Hagar TamanClinical Bioinformatics Research Group, Department of Clinical Medicine, Faculty of Health Sciences, UiT- The Arctic University of Norway, Tromsø, Norway.
Christopher G FentonClinical Bioinformatics Research Group, Department of Clinical Medicine, Faculty of Health Sciences, UiT- The Arctic University of Norway, Tromsø, Norway.ORCID https://orcid.org/0000-0002-9960-0967
Ruth H PaulssenClinical Bioinformatics Research Group, Department of Clinical Medicine, Faculty of Health Sciences, UiT- The Arctic University of Norway, Tromsø, Norway.ORCID https://orcid.org/0000-0001-6436-4143

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The gut microbiota contributes to an aberrant immune dysfunction associated with inflammatory bowel disease (IBD) and is believed to contribute to the disease development of ulcerative colitis (UC). In this study, a whole-transcriptomic data set containing mucosal tissue biopsies obtained from treatment-naïve UC patients (

Indexed as

gut microbiotainflammationMeta-transcriptomicsulcerative colitis

Identifiers

PMID41909912
PMCPMC12940147

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.