Evidence map›Paper›PMID 41914344›Full record

ArticleGenome biology and evolution2026

Dynamics of Expression Variability Contribute to Retention of Small-Scale vs. Whole-Genome Duplicates.

Haoran Cai, David L Des Marais

Abstract read
In one paragraph

Article in Genome biology and evolution, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Haoran CaiDepartment of Ecology and Evolutionary Biology, University of California, Los Angeles, CA 90095, USA.ORCID 0000-0003-3111-3780
David L Des MaraisDepartment of Civil and Environmental Engineering, Massachusetts Institute of Technology, 15 Vassar St., Cambridge, MA 02139, USA.ORCID 0000-0002-6772-6987

Funding

NSF 2239070
6 · The paper itself

Abstract

Genome analyses reveal that gene duplication in eukaryotes is pervasive, providing a primary source for the emergence of new genes. Nevertheless, the mechanisms influencing the probability of early duplicate retention and the emergence of functional biases,such as the enrichment of tandem duplicates in environmental responses, remain unclear. Here, to elucidate the mechanisms and factors determining gene retention, we study a frequently overlooked molecular feature-within-line expression variation, termed expression variability. We demonstrate that, on average, genes with duplicates exhibit higher expression variability than singletons. Furthermore, small-scale duplications (SSDs) and whole-genome duplications (WGDs) display contrasting functional outcomes and time-dependent profiles in expression variability. These findings suggest a potential overarching mechanism that facilitates gene expression divergence, functional gains of environmental responses, and duplicate retention following SSDs.

Indexed as

Evolution, MolecularGene DuplicationGenomeevolvabilitygene duplicationgene expressionvariability

Identifiers

PMID41914344
PMCPMC13069573

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.