Evidence map›Paper›PMID 41918784›Full record

ArticleFrontiers in molecular biosciences2026

TUBB2A expression and its prognostic significance in hepatocellular carcinoma revealed by cholesterol-metabolism-related gene profiling.

Shiwei Zhu, Yatong Ruan, Mengqi Zhao, Qianqian Zhang, Lulu Zhang, Wen Xu, Hui Zhang, Yuting Qian, Junjie Lin, Ruolin Wu and 5 more

Abstract read
In one paragraph

Article in Frontiers in molecular biosciences, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Shiwei Zhu *Department of Pathology, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Yatong Ruan *Department of Pathology, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Mengqi Zhao *Department of Pathology, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Qianqian ZhangDepartment of Pathology, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Lulu ZhangDepartment of Pathology, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Wen XuDepartment of Pathology, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Hui ZhangInnovation and Entrepreneurship Laboratory for College Students, Anhui Medical University, Hefei, China.
Yuting QianDepartment of Pathology, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Junjie LinDepartment of Infectious Diseases, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Ruolin WuDepartment of Hepatopancreatobiliary Surgery and Organ Transplantation Center, Department of General Surgery, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Ying DaiMedical Oncology, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Yufeng GaoDepartment of Infectious Diseases, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Ran JiaDepartment of Hepatobiliary and Pancreatic Surgery, the First Affiliated Hospital of Anhui Medical University, Hefei, China.
Yuanyuan WeiDepartment of Hospital Infection Prevention and Control, The First Affiliated Hospital of Anhui Medical University, Hefei, China.
Honghai XuDepartment of Pathology, The First Affiliated Hospital of Anhui Medical University, Hefei, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Hepatocellular carcinoma (HCC) exhibits significant molecular heterogeneity and is associated with a poor prognosis. The lack of validated biomarkers limits early diagnosis and effective prognosis. Identifying oncogenic drivers in HCC may enhance risk stratification and provide new therapeutic targets. Recent evidence links disrupted cholesterol metabolism to hepatic oncogenesis, and a comprehensive profiling of cholesterol-related genes may help identify metabolic oncogenic signatures and prognostic biomarkers for HCC. Methods: Bioinformatic analyses were performed using public databases to assess differential expression and the prognostic significance of TUBB2A. Gene set enrichment analysis (GSEA) was conducted to identify key biological pathways associated with TUBB2A expression in HCC. These findings were validated through RT-qPCR, Western blot, and immunohistochemistry on patient tissues. Functional studies included siRNA knockdown and plasmid overexpression in HCC cell lines, followed by assays for cellular proliferation, clonogenicity, migration, and invasion. Tumorigenicity was tested using xenograft models in nude mice. The prognostic value of TUBB2A was evaluated through survival curves and time-dependent ROC analysis. Results: TUBB2A was identified as a dysregulated and prognostically significant biomarker in HCC through bioinformatic analyses. Pathway analysis using databases like KEGG, GOBP, and Hallmark revealed significant enrichment of TUBB2A in pathways related to cholesterol metabolism, fatty acid biosynthesis, and steroid biosynthesis. Experimental validation demonstrated that TUBB2A is overexpressed in HCC tissues and cell lines. Elevated TUBB2A expression correlated with higher AFP levels, microvascular invasion, advanced tumor stages, and poorer overall survival. Functional assays showed that knockdown of TUBB2A suppressed proliferation, migration, invasion, and Discussion: TUBB2A plays a key role in promoting HCC tumorigenesis and is associated with adverse clinical outcomes. The integration of bioinformatic analyses and experimental validation establishes TUBB2A as a potential prognostic biomarker in HCC. Its role in regulating cholesterol metabolism suggests that TUBB2A may be a novel target for therapeutic interventions. Further studies should explore the clinical utility of TUBB2A, including its integration into multi-marker models and as a target for targeted therapy, offering potential avenues to improve HCC treatment strategies.

Indexed as

bioinformaticscholesterol metabolismgene set enrichment analysishepatocellular carcinomamedical knowledge–assisted machine learningprognostic biomarkersingle-cellRNA sequencingTUBB2A

Identifiers

PMID41918784
PMCPMC13033567

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.