Evidence map›Paper›PMID 41928952›Full record

ArticlebioRxiv : the preprint server for biology2026

Visualizing and sonifying neurodata (ViSoND) for enhanced observation.

Leah Blankenship, Scott C Sterrett, Dylan M Martins, Teresa M Findley, Elliot Abe, Philip R L Parker, Cristopher M Niell, Matthew C Smear

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Leah BlankenshipInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States.
Scott C SterrettDepartment of Neurobiology & Biophysics, University of Washington, Seattle, Washington, United States.
Dylan M MartinsInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States.
Teresa M FindleyInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States.
Elliot AbeInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States.
Philip R L ParkerInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States.
Cristopher M NiellInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States.ORCID 0000-0001-6283-3540
Matthew C SmearInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States.ORCID 0000-0003-4689-388X

Funding

Neural circuit computations for visual motion during natural primate behaviorsUF1NS116377 · NINDS · UNIVERSITY OF TEXAS AT AUSTIN · PI CAUWENBERGHS, GERT, CORMACK, LAWRENCE KEVIN · 2020 to 2020
$3.3M
Cortical visual processing for navigationR01NS121919 · NINDS · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI GOARD, MICHAEL, NIELL, CRISTOPHER M · 2024 to 2025
$1.9M
Navigation with complex odor dynamics: computational principles and neural circuit implementation in miceR01DC018789 · NIDCD · UNIVERSITY OF WASHINGTON · PI GIRE, DAVID HENRY · 2020 to 2024
$1.8M
Ethologically relevant short term memory in the olfactory bulbR01NS123903 · NINDS · UNIVERSITY OF OREGON · PI SMEAR, MATTHEW C · 2024 to 2025
$646k
NIDCD NIH HHS R01 DC018789NINDS NIH HHS R01 NS121919NINDS NIH HHS R01 NS123903NINDS NIH HHS UF1 NS116377
6 · The paper itself

Abstract

Neuroscience needs observation. Observation lets us evaluate data quality, judge whether models are biologically realistic, and generate new hypotheses. However, high-dimensional behavioral and neural data are too complex to be easily displayed and eye-tested. Computational methods can reduce the dimensionality of data and reveal statistically robust dynamical structure but often yield results that are difficult to relate back to the underlying biology. In addition, the choice of what parameters to quantify may not capture unexpectedly relevant aspects of the data. To supplement quantification with enhanced qualitative observation, we developed Visualization and Sonification of NeuroData (ViSoND), an open-source approach for displaying multiple data streams using video and sonification. Sonification is nothing new to neuroscience. Scientists have sonified their physiological preparations since Lord Adrian's earliest recordings. We extend this tradition by mapping multiple physiological datastreams to musical notes using MIDI. Synchronizing MIDI to video provides an opportunity to watch an animal's movement while listening to physiological signals such as action potentials. Here we provide two demonstrations of this approach. First, we used ViSoND to interpret behavioral structure revealed by a computational model trained on the breathing rhythms of freely behaving mice. Second, ViSoND revealed patterns of neural activity in mouse visual cortex corresponding to eye blinks, events that were previously filtered out of analysis. These use cases show that ViSoND can supplement quantitative rigor with observational interpretability. Additionally, ViSoND provides an accessible way to display data which may broaden the audience for communication of neuroscientific findings.

Identifiers

PMID41928952
PMCPMC13041969

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.