Evidence map›Paper›PMID 41935283›Full record

ArticleCellular & molecular biology letters2026

Integrated analysis of single-cell RNA sequencing, transcriptomics, and thermal proteome profiling identifies PLCG1 as the therapeutic target of isopimpinellin in treating rheumatoid arthritis.

Huantian Cui, Ning Wang, Feitian Min, Huan Pei, Yuming Wang, Hanzhou Li, Qianqian Wan, Yan Meng, Mingwei He, Xiaoman Lv and 7 more

Abstract read
In one paragraph

Article in Cellular & molecular biology letters, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Huantian Cui *First School of Clinical Medicine, Yunnan University of Chinese Medicine, Kunming, 650500, China.
Ning Wang *First School of Clinical Medicine, Yunnan University of Chinese Medicine, Kunming, 650500, China.
Feitian Min *First School of Clinical Medicine, Yunnan University of Chinese Medicine, Kunming, 650500, China.
Huan Pei *School of Integrative Chinese and Western Medicine, Tianjin University of Traditional Chinese Medicine, Tianjin, 301617, China.
Yuming WangSchool of Integrative Chinese and Western Medicine, Tianjin University of Traditional Chinese Medicine, Tianjin, 301617, China.
Hanzhou LiSchool of Integrative Chinese and Western Medicine, Tianjin University of Traditional Chinese Medicine, Tianjin, 301617, China.
Qianqian WanFirst School of Clinical Medicine, Yunnan University of Chinese Medicine, Kunming, 650500, China.
Yan MengDepartment of Rheumatology and Immunology, The First Affiliated Hospital of Xinjiang Medical University, Urumchi, 830054, China.
Mingwei HeFirst School of Clinical Medicine, Yunnan University of Chinese Medicine, Kunming, 650500, China.
Xiaoman LvScience and Technology Department, Yunnan University of Chinese Medicine, Kunming, 650500, China.
Liwei XingFirst School of Clinical Medicine, Yunnan University of Chinese Medicine, Kunming, 650500, China.
Zixuan LiMedical School, Xizang University, Lhasa, 850000, China.
Tianze PanSchool of Integrative Chinese and Western Medicine, Tianjin University of Traditional Chinese Medicine, Tianjin, 301617, China.
Renlin LiSecond School of Clinical Medicine, Yunnan University of Chinese Medicine, Kunming, 650500, China.
Weibo WenFirst School of Clinical Medicine, Yunnan University of Chinese Medicine, Kunming, 650500, China. wenweibo2020@163.com.
Xiangying KongInstitute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, China. xykong@icmm.ac.cn.
Yuhong BianSchool of Integrative Chinese and Western Medicine, Tianjin University of Traditional Chinese Medicine, Tianjin, 301617, China. bianyuhong_2012@163.com.

Funding

National Key Research and Development Program of China 2023YFF0724803National Natural Science Foundation of China 82360862National Natural Science Foundation of China 82405223National Natural Science Foundation of China 82460860Special Project for Basic Research Cooperation in Beijing-Tianjin-Hebei Region 23JCZXJC00180-J230036Yunling Scholars Program XDYC-YLXZ-2022-0027
6 · The paper itself

Abstract

backgroundIsopimpinellin (ISOP), derived from Toddalia asiatica (L.) Lam, is thought to possess anti-inflammatory potential. However, the effects of ISOP on rheumatoid arthritis (RA) and corresponding mechanisms remain unclear.

methodsWe evaluated the therapeutic effect of ISOP on RA using the collagen-induced arthritis (CIA) rat model. Subsequently, we determined the potential mechanisms of ISOP by combining single-cell RNA sequencing of rat synovial tissue in vivo with transcriptome analysis of macrophages in vitro. Molecular docking, thermal proteome profiling, cellular thermal shift assays, and drug affinity responsive target stability were then employed to identify the molecular targets of ISOP. Finally, we validated this target and explored the interaction between macrophages and RA-fibroblast-like synoviocytes (FLS) in vitro.

resultsWe found that ISOP improved pathological changes in CIA rats. Mechanistically, ISOP inhibited macrophage migration and M1 macrophage polarization, and downregulated Spp1 expression. Furthermore, ISOP restrained the RAS/ERK pathway in M1 macrophages. Importantly, PLCG1 is a direct target of ISOP. Silencing PLCG1 reduced the related inhibitory effects of ISOP on M1 macrophage polarization. In addition, the supernatant of macrophages treated with ISOP reduced the proliferation and activation of RA-FLS. Silencing PLCG1 eliminated the regulatory effects of ISOP in the macrophage-RA-FLS co-culture system.

conclusionsISOP exerts its anti-RA effects by targeting PLCG1 to inhibit the production of SPP1 in M1 macrophages.

Indexed as

Arthritis, RheumatoidPhospholipase C gammaProteomeTranscriptomeAnimalsArthritis, ExperimentalCell MovementGene Expression ProfilingMacrophagesMaleRatsRats, Sprague-DawleySequence Analysis, RNASingle-Cell AnalysisSingle-Cell Gene Expression AnalysisSynoviocytesPhospholipase C gammaProteomeFibroblast-like synoviocytesIsopimpinellinMacrophage polarizationPLCG1Rheumatoid arthritisscRNA-seqSPP1

Identifiers

PMID41935283
PMCPMC13281331

What Socratic holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.