Evidence mapPaperPMID 41935323Full record

ArticleBMC infectious diseases2026

A national surveillance study on five-year trends in AMR of E. coli from urine samples in Ethiopia.

Negga Asamene Abera, Senahara Korsa Wake, Semira Ebrahim Geleto, Degefu Beyene Gobene, Zeleke Ayenew Matebie, Etsehiwot Adamu Tsegaye, Amete Mihret Teshale, Mheret Tesfaye Gobena, Gebrie Alebachew Belete, Dawit Sekata Duressa and 30 more

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Article in BMC infectious diseases, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

40 authors.

Negga Asamene AberaEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Senahara Korsa WakeEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia. senahara2004@gmail.com.ORCID http://orcid.org/0000-0002-9528-9139
Semira Ebrahim GeletoEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.ORCID http://orcid.org/0000-0001-8353-7759
Degefu Beyene GobeneEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.ORCID http://orcid.org/0000-0001-7902-984X
Zeleke Ayenew MatebieEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.ORCID http://orcid.org/0000-0003-4216-6634
Etsehiwot Adamu TsegayeEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Amete Mihret TeshaleEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Mheret Tesfaye GobenaEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Gebrie Alebachew BeleteEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.ORCID http://orcid.org/0009-0001-8218-6229
Dawit Sekata DuressaEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Tewodros Minwuyelet AntenehEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Jemal Mohammed HussienEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Gemechis Bulti TuraEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Eshetu Gadisa DabaleEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Daniel Dejene WondimagegnehuEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Daniel Demissie GebremariamEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Birhan Moges EjiguEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.ORCID http://orcid.org/0009-0002-6961-4943
Dereje Mamuye G/TsadikEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.ORCID http://orcid.org/0000-0002-7153-9666
Addis Abebe EngidasewEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Ebissa Fekede AdebaEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Mulushewa G/EgziabhereEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Surafel Fentaw DinkuEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Estifanos TsigieEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Tesfa Addis KefaleEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Eliyas SeyoumEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Dawit AsefaEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Geremew TassewEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Gemechu Tadese LetaEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.ORCID http://orcid.org/0000-0003-0533-1979
Rajiha Abuboker IbrahimEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Abebe Aseffa NegeriEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.ORCID http://orcid.org/0000-0001-8113-6548
Meseret Asefa OdaEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Bruke Gezhagene BirhanuEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.ORCID http://orcid.org/0009-0002-7279-8966
Yonas Mekonnen GebeyehuEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.ORCID http://orcid.org/0000-0003-3683-0965
Dejenie Shiferaw TekluEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.ORCID http://orcid.org/0000-0002-6969-2768
Degefa HabteEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Muruts Berhane HailuAyder Compressive Specialized Hospital, Mekelle, Ethiopia.
Mulu Gebretsadik GebremedhinAyder Compressive Specialized Hospital, Mekelle, Ethiopia.
Kibra Hailu DestaAyder Compressive Specialized Hospital, Mekelle, Ethiopia.
Eyasu Tigabu SeyoumEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.
Bethelhem Getu BekeleEthiopian Public Health Institute (EPHI), Addis Ababa, Ethiopia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionAntimicrobial resistance has become a global public health threat putting the health of millions in danger. Therefore, it is imperative to monitor the trends of resistant bacterial pathogens to better inform public health policies aiming at containing the spread of antimicrobial resistance.

objectiveThis study aimed to assess the prevalence and trends of E. coli resistance from 2020 to 2024 among patients suspected of urinary tract infection in Ethiopia.

methodsFor this study, five years data (2020–2024) from 16 laboratory-based AMR surveillance system sentinel sites were captured by WHONET software and analyzed using R programming language. The data included 4696 E. coli isolates from urine specimens. Descriptive statistics were used to assess the prevalence of antimicrobial resistance and its distribution. Correspondence analysis was used to demonstrate the antimicrobial resistance profile by visualizing the E. coli resistance levels to antibiotics. Furthermore, the Cochran Armitage trend test was employed to test the null hypothesis of no linear trend in antimicrobial resistance against the alternative of a linear trend.

resultsThe majority of patients (n = 2353, 58%) with isolates (n = 2711, 57.7%) were females and 1703 (42%) of patients with 1985 (42.3%) isolates were males. Among 16 sentinel sites, Tikur Anbessa Specialized Hospital and St. Paul’s Hospital contributed the highest numbers of E. coli isolates. Ampicillin, Cefazolin, Cefotaxime, Cefuroxime, and Trimethoprim/Sulfamethoxazole were among a high burden of E. coli resistance rates exceeding 70%, whereas Imipenem, Meropenem, Nitrofurantoin, Amikacin, and Gentamicin exhibited E. coli resistance rates below 30% across 2020 to 2024.

conclusionThe study findings revealed that a high burden and increasing trends of antimicrobial resistance among E.coli isolates from urine samples. These results highlight a critical need to strengthen the national AMR surveillance systems and antimicrobial stewardship programs to help control the growing antimicrobial resistance in the country.

Indexed as

Anti-Bacterial AgentsDrug Resistance, BacterialDrug Resistance, Multiple, BacterialEscherichia coliEscherichia coli InfectionsUrinary Tract InfectionsAdolescentAdultChildChild, PreschoolEthiopiaFemaleFirst Generation CephalosporinsHumansInfantMaleAnti-Bacterial AgentsFirst Generation CephalosporinsThird Generation CephalosporinsAMR surveillanceE. coliEthiopiaResistance trendsUrine

Identifiers

PMID41935323
PMCPMC13181901

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.