Evidence map›Paper›PMID 41939511›Full record

ArticleJournal of virus eradication2026

Single-cell transcriptomic profiling of the splenic and peripheral immune landscape in rhesus macaques during CHIKV infection.

Yun Yang, Qing Huang, Hao Yang, Yanan Zhou, Junbin Wang, Cong Tang, Wenhai Yu, Haixuan Wang, Daoju Wu, Hongyu Chen and 5 more

Abstract read
In one paragraph

Article in Journal of virus eradication, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Yun YangState Key Laboratory of Respiratory Health and Multimorbidity. Institute of Medical Biology, Chinese Academy of Medical Sciences & Peking Union Medical College (IMBCAMS&PUMC), 935 Jiaoling Road, Kunming, Yunnan 650118, China.
Qing HuangState Key Laboratory of Respiratory Health and Multimorbidity. Institute of Medical Biology, Chinese Academy of Medical Sciences & Peking Union Medical College (IMBCAMS&PUMC), 935 Jiaoling Road, Kunming, Yunnan 650118, China.
Hao YangState Key Laboratory of Respiratory Health and Multimorbidity. Institute of Medical Biology, Chinese Academy of Medical Sciences & Peking Union Medical College (IMBCAMS&PUMC), 935 Jiaoling Road, Kunming, Yunnan 650118, China.
Yanan ZhouState Key Laboratory of Respiratory Health and Multimorbidity. Institute of Medical Biology, Chinese Academy of Medical Sciences & Peking Union Medical College (IMBCAMS&PUMC), 935 Jiaoling Road, Kunming, Yunnan 650118, China.
Junbin WangState Key Laboratory of Respiratory Health and Multimorbidity. Institute of Medical Biology, Chinese Academy of Medical Sciences & Peking Union Medical College (IMBCAMS&PUMC), 935 Jiaoling Road, Kunming, Yunnan 650118, China.
Cong TangState Key Laboratory of Respiratory Health and Multimorbidity. Institute of Medical Biology, Chinese Academy of Medical Sciences & Peking Union Medical College (IMBCAMS&PUMC), 935 Jiaoling Road, Kunming, Yunnan 650118, China.
Wenhai YuState Key Laboratory of Respiratory Health and Multimorbidity. Institute of Medical Biology, Chinese Academy of Medical Sciences & Peking Union Medical College (IMBCAMS&PUMC), 935 Jiaoling Road, Kunming, Yunnan 650118, China.
Haixuan WangState Key Laboratory of Respiratory Health and Multimorbidity. Institute of Medical Biology, Chinese Academy of Medical Sciences & Peking Union Medical College (IMBCAMS&PUMC), 935 Jiaoling Road, Kunming, Yunnan 650118, China.
Daoju WuState Key Laboratory of Respiratory Health and Multimorbidity. Institute of Medical Biology, Chinese Academy of Medical Sciences & Peking Union Medical College (IMBCAMS&PUMC), 935 Jiaoling Road, Kunming, Yunnan 650118, China.
Hongyu ChenState Key Laboratory of Respiratory Health and Multimorbidity. Institute of Medical Biology, Chinese Academy of Medical Sciences & Peking Union Medical College (IMBCAMS&PUMC), 935 Jiaoling Road, Kunming, Yunnan 650118, China.
Bai LiState Key Laboratory of Respiratory Health and Multimorbidity. Institute of Medical Biology, Chinese Academy of Medical Sciences & Peking Union Medical College (IMBCAMS&PUMC), 935 Jiaoling Road, Kunming, Yunnan 650118, China.
Wenqi QuanState Key Laboratory of Respiratory Health and Multimorbidity. Institute of Medical Biology, Chinese Academy of Medical Sciences & Peking Union Medical College (IMBCAMS&PUMC), 935 Jiaoling Road, Kunming, Yunnan 650118, China.
Jiandong ShiState Key Laboratory of Respiratory Health and Multimorbidity. Institute of Medical Biology, Chinese Academy of Medical Sciences & Peking Union Medical College (IMBCAMS&PUMC), 935 Jiaoling Road, Kunming, Yunnan 650118, China.
Qiangming SunState Key Laboratory of Respiratory Health and Multimorbidity. Institute of Medical Biology, Chinese Academy of Medical Sciences & Peking Union Medical College (IMBCAMS&PUMC), 935 Jiaoling Road, Kunming, Yunnan 650118, China.
Shuaiyao LuState Key Laboratory of Respiratory Health and Multimorbidity. Institute of Medical Biology, Chinese Academy of Medical Sciences & Peking Union Medical College (IMBCAMS&PUMC), 935 Jiaoling Road, Kunming, Yunnan 650118, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chikungunya virus (CHIKV) is a re-emerging arbovirus causing acute febrile illness and chronic debilitating arthritis, thereby imposing significant global public health and economic burdens. While robust immune responses involving inflammatory cytokines and immune cell infiltration characterize acute infection, the cellular mechanisms underlying pathogenesis and chronicity remain incompletely defined. In this study, we employed single-cell RNA sequencing (scRNA-seq) to comprehensively profile splenic and peripheral blood mononuclear cells (PBMCs) immune responses in rhesus macaques at day 7 post CHIKV infection, an acute phase. Splenic neutrophils marked recruitment, upregulation of

Indexed as

Acute phaseChikungunya virusNeutrophil extracellular trapsSingle-cell RNA sequencingTh1/Th17 differentiation

Identifiers

PMID41939511
PMCPMC13049305

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.