Evidence map›Paper›PMID 41963377›Full record

ArticleScientific data2026

Chromosome-level genome assembly and annotation of the moon jellyfish Aurelia coerulea.

Xinyue Hu, Yang Guo, Ze Zhang, Liyuan Wang, Duoyuan Chen, Zhenkun Zhuang, Minxiao Wang, Shiping Liu, Song Feng

Abstract read
In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Xinyue Hu *College of Life Sciences, University of Chinese Academy of Sciences, Beijing, 100049, China.
Yang Guo *Institute of Oceanology, Chinese Academy of Sciences, Qingdao, 266071, China.
Ze Zhang *State Key Laboratory of Genome and Multi-omics Technologies, BGI Research, Hangzhou, 310030, China. zhangze21@mails.ucas.ac.cn.ORCID http://orcid.org/0000-0002-2753-135X
Liyuan WangInstitute of Oceanology, Chinese Academy of Sciences, Qingdao, 266071, China.
Duoyuan ChenState Key Laboratory of Genome and Multi-omics Technologies, BGI Research, Hangzhou, 310030, China.
Zhenkun ZhuangState Key Laboratory of Genome and Multi-omics Technologies, BGI Research, Hangzhou, 310030, China.
Minxiao WangInstitute of Oceanology, Chinese Academy of Sciences, Qingdao, 266071, China.ORCID http://orcid.org/0000-0002-6567-3295
Shiping LiuState Key Laboratory of Genome and Multi-omics Technologies, BGI Research, Hangzhou, 310030, China.ORCID http://orcid.org/0000-0003-0019-619X
Song FengInstitute of Oceanology, Chinese Academy of Sciences, Qingdao, 266071, China. fengsong@qdio.ac.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aurelia coerulea (moon jellyfish), a radially symmetrical metazoan in the phylum Cnidaria, possesses key features pertinent to understanding the evolutionary origins of nervous systems. Here, we employed a combination of long-read sequencing, short-read sequencing, and Hi-C chromatin conformation capture techniques to generate a chromosome-level assembly of the A. coerulea genome. The final assembly comprises approximately 554.10 Mb distributed across 21 chromosomes, achieving a scaffold N50 of 24.06 Mb and demonstrating high completeness (protein BUSCO score: 93.0%). Approximately 71.48% of the genome consists of transposable elements. We identified 26,777 protein-coding genes, of which approximately 72.28% have been functionally annotated. This chromosome-level genome provides an essential resource for elucidating early neural evolution and advancing our understanding of cnidarian biology.

Indexed as

ChromosomesGenomeScyphozoaAnimalsDatasets as TopicDNA Transposable ElementsMolecular Sequence AnnotationDNA Transposable Elements

Identifiers

PMID41963377
PMCPMC13243523

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.