Evidence map›Paper›PMID 41965838›Full record

ArticleAlzheimer's research & therapy2026

Genome-wide investigation of synthetic rescue interactions in Alzheimer's disease implicates glial lipid and sterol metabolism.

Jun Ki Yoo, Ju Han Kim

Abstract read
In one paragraph

Article in Alzheimer's research & therapy, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jun Ki YooSeoul National University Biomedical Informatics (SNUBI), Division of Biomedical Informatics, Seoul National University College of Medicine, Seoul, 03080, Republic of Korea.ORCID 0009-0003-0811-2904
Ju Han KimSeoul National University Biomedical Informatics (SNUBI), Division of Biomedical Informatics, Seoul National University College of Medicine, Seoul, 03080, Republic of Korea. juhan@snu.ac.kr.ORCID 0000-0003-1522-9038

Funding

Alzheimer's Disease Genetics ConsortiumU01AG032984 · NIA · UNIVERSITY OF PENNSYLVANIA · PI SCHELLENBERG, GERARD DAVID · 2009 to 2024
$60.4M
SUPPLEMENT TO RUSH ALZHEIMERS DISEASE CENTER COREP30AG010161 · NIA · RUSH UNIVERSITY MEDICAL CENTER · PI BARNES, LISA L · 1991 to 2020
$49.1M
EPIDEMIOLOGY OF NEURAL RESERVE AND NEUROBIOLOGY IN AGINGR01AG017917 · NIA · RUSH UNIVERSITY MEDICAL CENTER · PI BENNETT, DAVID ALAN · 2001 to 2023
$43.3M
RISK FACTORS, PATHOLOGY, AND CLINICAL EXPRESSIONS OF ADR01AG015819 · NIA · RUSH UNIVERSITY MEDICAL CENTER · PI BENNETT, DAVID ALAN · 1998 to 2024
$21.4M
Multi-omic network-directed proteoform discovery, dissection and functional validation to prioritize novel AD therapeutic targetsU01AG061356 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BENNETT, DAVID ALAN, DE JAGER, PHILIP L · 2018 to 2022
$13.7M
Deconstructing and modeling the single cell architecture of the Alzheimer brainRF1AG057473 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BENNETT, DAVID ALAN, DE JAGER, PHILIP L · 2017 to 2018
$4.0M
National Research Foundation of Korea RS-2023-NR077290NIA NIH HHS P30 AG010161NIA NIH HHS R01 AG015819NIA NIH HHS R01 AG017917NIA NIH HHS RF1 AG057473NIA NIH HHS U01 AG032984NIA NIH HHS U01 AG061356Seoul National University Hospital Education and Research Encouragement Fund
6 · The paper itself

Abstract

backgroundSynthetic rescue (SR) interactions, where a disease-promoting alteration in one gene is compensated by a secondary alteration in another gene, remain largely unexplored in Alzheimer’s disease (AD). Here, we performed a genome-wide investigation of SR gene pairs that mitigate the genetic risk of AD.

methodsUsing whole exome sequencing (WES) data from the Alzheimer’s Disease Sequencing Project (ADSP) participants (n = 9,895), we first identified AD risk genes by two complementary methods: Single-variant analysis and Gene-wise Variant Burden (GVB) analysis. We then performed a genome-wide log odds ratio comparison to identify candidate SR gene pairs and further prioritized them via Cox proportional hazards regression. Validation and single-cell analyses were performed in the Religious Orders Study and Rush Memory and Aging Project (ROSMAP) cohort.

resultsAmong the 37 candidate SR gene pairs, 27 pairs showing significant protective effects (HR < 1, FDR < 0.05) in Cox regression were prioritized. Notably, NR4A1, SULT2A1, AKR1C4, OR52H1, ARMC7, RBAK-RBAKDN, DMC1 for APOE, and LPP, ZNF510 for TREM2 reduced the hazard of AD onset by more than half. The prioritized SR pairs were validated in ROSMAP cohort using a synthetic rescue score (SRS) that quantifies the cumulative protective effect of rescuer genes against risk gene burden. We observed that SRS was significantly associated with delayed AD onset. In addition, SRS was significantly associated with better cognitive outcomes but not with neuropathological burden, suggesting that SR pairs may confer cognitive resilience. Functional enrichment and single cell analyses highlighted lipid and sterol metabolism in oligodendrocytes and astrocytes as a plausible biological mechanism of SR interactions in AD.

conclusionsOur study extends understanding of SR interactions in AD, implicating glial lipid and sterol metabolism as a key underlying mechanism and providing novel insights for therapeutic strategies beyond targeting AD risk loci.

Indexed as

Alzheimer DiseaseLipid MetabolismNeurogliaSterolsAgedExome SequencingFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansMaleSterolsAlzheimer’s diseaseCognitive resilienceGenetic interactionGlial cellLipid metabolismSterol metabolismSynthetic rescueWhole exome sequencing

Identifiers

PMID41965838
PMCPMC13262459

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.