Evidence map›Paper›PMID 41972152›Full record

ArticleFrontiers in immunology2026

Genetically prioritized mitochondrial regulators of advanced renal failure: multi-omic Mendelian randomization and biological plausibility assessment in allograft fibrosis.

Qinghuan Shen, Runmin Ding, Zhiyu Wen, Dengyuan Feng, Jianjian Zhang, Jiawen Liu, Qianguang Han, Li Sun, Hao Chen, Shuang Fei and 3 more

Abstract read
In one paragraph

Article in Frontiers in immunology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Qinghuan Shen *The First Affiliated Hospital with Nanjing Medical University, Department of Urology, Nanjing Medical University, Nanjing, China.
Runmin Ding *The Second Affiliated Hospital of Nanjing Medical University, Jiangsu Key Laboratory of Urological Disease Prevention and Treatment, Department of Urology, Nanjing Medical University, Nanjing, China.
Zhiyu Wen *The First Affiliated Hospital with Nanjing Medical University, Department of Urology, Nanjing Medical University, Nanjing, China.
Dengyuan FengNanjing Drum Tower Hospital, Department of Andrology, Nanjing, China.
Jianjian ZhangThe First Affiliated Hospital with Nanjing Medical University, Department of Urology, Nanjing Medical University, Nanjing, China.
Jiawen LiuThe First Affiliated Hospital with Nanjing Medical University, Department of Urology, Nanjing Medical University, Nanjing, China.
Qianguang HanThe First Affiliated Hospital with Nanjing Medical University, Department of Urology, Nanjing Medical University, Nanjing, China.
Li SunThe First Affiliated Hospital with Nanjing Medical University, Department of Urology, Nanjing Medical University, Nanjing, China.
Hao ChenThe First Affiliated Hospital with Nanjing Medical University, Department of Urology, Nanjing Medical University, Nanjing, China.
Shuang FeiThe First Affiliated Hospital with Nanjing Medical University, Department of Urology, Nanjing Medical University, Nanjing, China.
Zhen XuThe Affiliated Taizhou People's Hospital of Nanjing Medical University, Department of Urology, Nanjing Medical University, Taizhou, China.
Ruijinlin HaoThe First Affiliated Hospital with Nanjing Medical University, Department of Anesthesiology, Nanjing Medical University, Nanjing, China.
Ruoyun TanThe First Affiliated Hospital with Nanjing Medical University, Department of Urology, Nanjing Medical University, Nanjing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Advanced renal failure remains a major global health burden. Mitochondrial dysfunction is frequently observed during progressive kidney injury and chronic allograft dysfunction (CAD), but observational data cannot distinguish causal involvement from secondary consequences. We applied a multi-omic genetic prioritization framework to evaluate whether inherited variation affecting mitochondrial gene regulation is associated with a proxy phenotype for advanced renal failure and fibrotic allograft remodeling. Methods: We integrated cis-mQTL (DNA methylation), cis-eQTL (gene expression), and cis-pQTL (plasma protein) data for MitoCarta3.0 genes with a UK Biobank GWAS of kidney transplant recipient status (369 cases, 397,602 controls) as a proxy endpoint for advanced renal failure. Summary-data-based Mendelian randomization (SMR; Wald ratio) was performed using a single lead cis-QTL instrument per gene per layer, with HEIDI heterogeneity testing and Bayesian colocalization to assess whether molecular QTL and outcome signals were consistent with a shared causal variant (PPH4 ≥ 0.70). Because no association survived false discovery rate (FDR) correction across the mitochondrial gene set, we used a tiered, exploratory prioritization scheme based on nominal MR evidence and colocalization. Instrument strength metrics (F-statistics and R²) are reported. Results: At a nominal threshold ( Conclusions: Given the limited number of outcome cases, the proxy nature of transplant recipient status, and no FDR-significant associations, the genetic results should be interpreted as exploratory and hypothesis-generating rather than causal proof. Nonetheless, multi-omic genetic prioritization with kidney-relevant experimental data highlights mitochondrial pathways as plausible contributors to advanced renal failure and fibrotic allograft remodeling, motivating replication in larger outcome GWAS and kidney-relevant QTL resources.

Indexed as

Kidney TransplantationMitochondriaRenal InsufficiencyAllograftsAnimalsDNA MethylationFibrosisGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansMendelian Randomization AnalysisMiceMultiomicsQuantitative Trait Lociallograft fibrosischronic allograft dysfunctionkidney transplantationMendelian randomizationmitochondrial dysfunctionNDUFA13

Identifiers

PMID41972152
PMCPMC13065693

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.