Evidence map›Paper›PMID 41973929›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2026

Deep learning framework for quantifying self-organization in

Jiangguo Zhang, Eduardo A Caro, Peiying Chen, Trosporsha Tasnim Khan, Patrick A Murphy, Lawrence J Shimkets, Ankit B Patel, Roy D Welch, Oleg A Igoshin

Erratum issuedAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Jiangguo ZhangDepartment of Bioengineering, Rice University, Houston, TX 77005.ORCID 0000-0001-6504-4360
Eduardo A CaroDepartment of Biology, Syracuse University, Syracuse, NY 13244.ORCID 0000-0003-4312-2844
Peiying ChenDepartment of Biology, Syracuse University, Syracuse, NY 13244.ORCID 0009-0004-7655-9887
Trosporsha Tasnim KhanDepartment of Biology, Syracuse University, Syracuse, NY 13244.
Patrick A MurphyDepartment of Bioengineering, Rice University, Houston, TX 77005.ORCID 0000-0003-1321-8749
Lawrence J ShimketsDepartment of Microbiology, University of Georgia, Athens, GA 30602.
Ankit B Patel *Department of Electrical and Computer Engineering, Rice University, Houston, TX 77005.
Roy D Welch *Department of Biology, Syracuse University, Syracuse, NY 13244.
Oleg A IgoshinDepartment of Bioengineering, Rice University, Houston, TX 77005.ORCID 0000-0002-1449-4772

Funding

NSF | BIO | Division of Integrative Organismal Systems (IOS) 1856742 1856665 1951025
6 · The paper itself

Abstract

Under starvation,

Indexed as

Deep LearningMyxococcus xanthusAutoencoderConvolutional Neural NetworksGenerative Adversarial NetworksImage Processing, Computer-AssistedPhenotypeAIbacterial developmentdeep learningfeature extractionpattern formation

Identifiers

PMID41973929
PMCPMC13099597

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.