Evidence map›Paper›PMID 41978949›Full record

ArticleTissue barriers2026

Integrated transcriptomic and functional characterization of Claudin-1 reveals its oncogenic and immunomodulatory roles in pancreatic ductal adenocarcinoma.

Anju Surendranath, Yogain Taank, Saira Hamid, Tharini Karthikeyan, Ikhlak Ahmed, Imadeldin Elfaki, Rashid Mir, Rakesh Kumar, Sameer Mirza, Mayank Singh and 5 more

Abstract read
In one paragraph

Article in Tissue barriers, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Anju SurendranathMetabolic and Mendelian Disorders Clinical Research Program, Precision OMICs Research & Translational Science, Sidra Medicine, Doha, Qatar.
Yogain TaankDepartment of Surgery and Cancer Biology, University of Kansas Medical Center, Kansas City, KS, USA.
Saira HamidWatson-Crick Center for Molecular Medicine, Islamic University of Science and Technology, Kashmir, India.
Tharini KarthikeyanMetabolic and Mendelian Disorders Clinical Research Program, Precision OMICs Research & Translational Science, Sidra Medicine, Doha, Qatar.
Ikhlak AhmedMetabolic and Mendelian Disorders Clinical Research Program, Precision OMICs Research & Translational Science, Sidra Medicine, Doha, Qatar.
Imadeldin ElfakiDepartment of Biochemistry, Faculty of Science, University of Tabuk, Tabuk, Saudi Arabia.
Rashid MirDepartment of Medical Laboratory Technology, Prince Fahad Bin Sultan Chair for Biomedical Research, Faculty of Applied Medical Sciences, University of Tabuk, Tabuk, Saudi Arabia.
Rakesh KumarSchool of Biotechnology, Shri Mata Vaishno Devi University, Katra, India.
Sameer MirzaDepartment of Chemistry, College of Science (COS), United Arab Emirates University (UAEU), Al Ain, United Arab Emirates.
Mayank SinghDepartment of Medical Oncology, Dr. B.R. Ambedkar Institute Rotary Cancer Hospital, All India Institute of Medical Sciences, New Delhi, India.
Shahab UddinTranslational Research Institute, Academic Health System, Hamad Medical Corporation, Doha, Qatar.
Ammira S Al-Shabeeb AkilMetabolic and Mendelian Disorders Clinical Research Program, Precision OMICs Research & Translational Science, Sidra Medicine, Doha, Qatar.
Muzafar A MachaWatson-Crick Center for Molecular Medicine, Islamic University of Science and Technology, Kashmir, India.
Punita DhawanDepartment of Surgery and Cancer Biology, University of Kansas Medical Center, Kansas City, KS, USA.
Ajaz A BhatMetabolic and Mendelian Disorders Clinical Research Program, Precision OMICs Research & Translational Science, Sidra Medicine, Doha, Qatar.ORCID 0000-0003-3640-6275

Funding

Impact of CLDN1 inhibition on chemoresistance and metastasis of colon cancerR01CA250383 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Punita Dhawan · 2021 to 2026
$3.0M
CSRD VA I01 CX002228NCI NIH HHS R01 CA250383
6 · The paper itself

Abstract

Pancreatic ductal adenocarcinoma (PDAC) remains among the deadliest malignancies, driven by its invasive nature and lack of effective biomarkers. Disruption of the epithelial barrier, mediated by tight junction components, is a critical yet underexplored contributor to PDAC progression. Claudins, integral regulators of tight junction integrity, display altered expression across cancers, but their prognostic and immunomodulatory roles in PDAC remain unclear. We performed an integrative analysis of 177 RNA-Seq datasets from TCGA and GTEx to characterize Claudin family alterations in PDAC. Differential expression, copy number variation, methylation, and co-expression networks were analyzed alongside clinical and survival data. Prognostic significance was assessed using Kaplan - Meier and Cox regression analyses, while immune cell infiltration was examined using deconvolution algorithms. Functional validation of Claudin-1 was conducted in Capan-1 cells using CRISPR/Cas9 knockout, followed by proliferation, wound-healing, and Western blot assays. Ten Claudin genes were significantly dysregulated, with Claudin-1 and Claudin-4 frequently amplified and associated with advanced stage and poor survival. High Claudin-1 expression correlated with reduced immune infiltration, indicating an immune-excluded phenotype characterized by immune cells retained in the tumor stroma but largely absent from the tumor parenchyma. Claudin-1 knockout markedly inhibited proliferation, migration, and EMT, evidenced by downregulation of Snail and Slug and restoration of E-cadherin expression. This integrative transcriptomic and functional study identifies Claudin-1 as a key driver of PDAC aggressiveness and immune modulation. These findings establish Claudin-1 as a promising prognostic biomarker and therapeutic target for restoring epithelial integrity and counteracting immune evasion in pancreatic cancer.

Indexed as

Carcinoma, Pancreatic DuctalClaudin-1Pancreatic NeoplasmsTranscriptomeGene Expression Regulation, NeoplasticHumansClaudin-1CLDN1 protein, humanClaudinsdifferentially expressed genesepithelial-mesenchymal transitiongenomic aberrationsimmune infiltrationKaplan-Meier survival plotsmethylationpancreatic ductal adenocarcinoma

Identifiers

PMID41978949
PMCPMC13540116

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.