Evidence mapPaperPMID 41979739Full record

ArticleFunctional & integrative genomics2026

Integration of clinical and cellular lipidomics identifies a serum metabolite signature predictive of oxaliplatin resistance in colorectal cancer.

Xue-Fei Wu, Li-Ye Xie, Fu-Wei Lian, Hao-Tang Wei, Shu-Fang Ning, Bang-Li Hu

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Article in Functional & integrative genomics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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6 authors.

Xue-Fei Wu *Department of Experimental Research, Guangxi Medical University Cancer Hospital, No. 71 Hedi Road, Nanning, Guangxi, 530021, China.
Li-Ye Xie *Department of Experimental Research, Guangxi Medical University Cancer Hospital, No. 71 Hedi Road, Nanning, Guangxi, 530021, China.
Fu-Wei Lian *Department of Experimental Research, Guangxi Medical University Cancer Hospital, No. 71 Hedi Road, Nanning, Guangxi, 530021, China.
Hao-Tang WeiDepartment of Gastrointestinal Surgery, Third Affiliated Hospital of Guangxi Medical University, Nanning, 530031, China.
Shu-Fang NingDepartment of Experimental Research, Guangxi Medical University Cancer Hospital, No. 71 Hedi Road, Nanning, Guangxi, 530021, China. ningshufang@gxmu.edu.cn.
Bang-Li HuDepartment of Experimental Research, Guangxi Medical University Cancer Hospital, No. 71 Hedi Road, Nanning, Guangxi, 530021, China. hubangli@gxmu.edu.cn.

Funding

National Natural Science Foundation of China 82560520
6 · The paper itself

Abstract

backgroundOxaliplatin resistance remains a major obstacle in colorectal cancer (CRC) treatment. Lipid metabolism reprogramming is increasingly implicated in chemoresistance, but the clinically applicable lipid biomarkers are lacking.

methodsWe performed untargeted lipidomic profiling using LC–MS/MS on serum from 60 CRC patients (30 chemotherapy-sensitive, 30 -resistant) and an CRC cell (oxaliplatin-sensitive vs. -resistant). Differentially expressed metabolites (DEMs) were screened, and overlapping DEMs were prioritized using Random Forest and LASSO regression. A predictive signature was developed and validated in an independent cohort of 80 patients. Oxaliplatin was used to treat the CRC cells and validate the metabolite levels.

resultsWe identified 238 and 79 DEMs in serum and cells, respectively. Intersection and machine learning selected three metabolites, including: docosapentaenoic acid (DA), 7-(1-imidazolyl) heptanoic acid (IHA), and dihydroxyacetone phosphate (DHAP). The predictive signature achieved AUC of 0.806 (discovery) and 0.838 (validation), with excellent calibration and positive net benefit on decision curve analysis. The signature scores were significantly higher in patients with distant metastasis or advanced tumor stage, suggesting a link between metabolic dysregulation and disease progression. The signature was independent of conventional tumor markers. The experiment of oxaliplatin- resistant cells revealed that these three metabolites exhibited little influence by treatment of oxaliplatin.

conclusionThis integrative lipidomics approach yields a robust serum signature for predicting oxaliplatin resistance in CRC, with potential to reflect both therapeutic response and tumor aggressiveness.

Indexed as

Antineoplastic AgentsBiomarkers, TumorColorectal NeoplasmsDrug Resistance, NeoplasmLipidomicsMetabolomeOxaliplatinAgedFemaleHumansLipid MetabolismMaleMiddle AgedAntineoplastic AgentsBiomarkers, TumorOxaliplatincolorectal cancerlipidomicsmachine learningmetabolite signatureoxaliplatin resistance

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PMID41979739

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.