Evidence map›Paper›PMID 41987066›Full record

ArticleBMC microbiology2026

Genomic insights into Serratia bockelmanii strain 201: unlocking its potential for plant growth promotion and salt stress tolerance.

Naima Sayahi, Nourelhouda Abdelkefi, Chantal Ebel, Tahar Mechichi, Stefaan Werbrouck, Moez Hanin

Abstract read
In one paragraph

Article in BMC microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Naima SayahiLaboratory of Functional Genomics and Plant Physiology, Institute of Biotechnology of Sfax, University of Sfax, BP "1175", Sfax, 3038, Tunisia.
Nourelhouda AbdelkefiLaboratoire de Biochimie Et de Génie Enzymatique Des Lipases, Ecole Nationale d'Ingénieurs de Sfax, Université de Sfax, Sfax, Tunisia.
Chantal EbelLaboratory of Functional Genomics and Plant Physiology, Institute of Biotechnology of Sfax, University of Sfax, BP "1175", Sfax, 3038, Tunisia.
Tahar MechichiLaboratoire de Biochimie Et de Génie Enzymatique Des Lipases, Ecole Nationale d'Ingénieurs de Sfax, Université de Sfax, Sfax, Tunisia.
Stefaan WerbrouckLaboratory of Applied In Vitro Plant Biotechnology, Faculty of Bioscience Engineering, University of Ghent, Valentin Vaerwyckweg 1, Ghent, 9000, Belgium.
Moez HaninLaboratory of Functional Genomics and Plant Physiology, Institute of Biotechnology of Sfax, University of Sfax, BP "1175", Sfax, 3038, Tunisia. moez.hanin@isbs.usf.tn.

Funding

HORIZON EUROPE Widening Participation and Strengthening the European Research Area N° 101078905
6 · The paper itself

Abstract

backgroundThis study investigated Serratia bockelmanii sp. 201 (strain C2), a bacterium isolated from the rhizosphere of Opuntia ficus-indica. This strain demonstrates relevant plant growth-promoting (PGP) traits and enhances salt stress tolerance in crops. While its phenotypic characteristics have been documented, the genomic basis of these traits remains unexplored.

resultsWhole genome sequencing of the strain C2 revealed a 5.24 Mbp circular chromosome with 59.18% GC content, encoding 4,841 protein-coding genes. Pan-genome analysis demonstrated a 99.06% average nucleotide identity (ANI) with Serratia bockelmanii. Functional genomic annotation identified key plant growth-promoting (PGP) genes, including those involved in phosphate solubilization, siderophore biosynthesis, indole-3-acetic acid (IAA) production, and volatile organic compound (VOC) synthesis. Notably, the genome lacked high-risk antimicrobial resistance (AMR) genes while possessing genes associated with stress tolerance. Furthermore, WGS illuminated the pathways and regulatory networks employed by strain C2 to synthesize various growth regulators, enhance nutrient availability, and consequently promote plant health and stress tolerance, with tomato seedling assays specifically confirming VOC-mediated salt stress alleviation by this strain.

conclusionsThis study provides the first genomic evidence for the multifunctional PGP traits and salt stress mitigation mechanisms of Serratia bockelmanii sp. 201. The absence of pathogenic markers supports its potential as a safe biofertilizer for saline agriculture. Moreover, in vitro tomato growth assays demonstrate the beneficial effects of VOCs emitted by Serratia bockelmanii sp. 201. Further studies are needed to profile these VOCs and to validate the performance of this PGPR strain under stress conditions in greenhouse and field trials.

Indexed as

Genome, BacterialPlant DevelopmentSalt ToleranceSerratiaGenomicsIndoleacetic AcidsPhylogenyPlant Growth RegulatorsRhizosphereSalt StressSiderophoresSoil MicrobiologyVolatile Organic CompoundsWhole Genome Sequencingindoleacetic acidIndoleacetic AcidsPlant Growth RegulatorsSiderophoresVolatile Organic CompoundsPlant growth-promoting rhizobacteriaSerratia bockelmaniiVolatile organic compoundsWhole genome sequencing; Salt stress

Identifiers

PMID41987066
PMCPMC13202888

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.