Evidence map›Paper›PMID 41989328›Full record

ArticleThe Journal of infectious diseases2026

Tuberculosis Disease Severity Assessment Using Clinical Variables and Radiology Enabled by Artificial Intelligence.

Marwan Ghanem, Ratnam Srivastava, Yasha Ektefaie, Drew Hoppes, Gabriel Rosenfeld, Ziv Yaniv, Alina Grinev, Ava Y Xu, Eunsol Yang, Gustavo E Velásquez and 5 more

Abstract read
In one paragraph

Article in The Journal of infectious diseases, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Insights into the Role of Rifampicin Exposure and Clinical Baseline Covariates on the Response to Pulmonary Tuberculosis Treatment.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2026
    Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Marwan GhanemDepartment of Biomedical Informatics, Harvard Medical School,Boston, Massachusetts, USA.ORCID 0000-0002-6768-4537
Ratnam SrivastavaDepartment of Biomedical Informatics, Harvard Medical School,Boston, Massachusetts, USA.
Yasha EktefaieDepartment of Biomedical Informatics, Harvard Medical School,Boston, Massachusetts, USA.ORCID 0000-0003-2759-4470
Drew HoppesNational Institute of Allergy and Infectious Diseases, National Institutes of Health,Bethesda, Maryland, USA.
Gabriel RosenfeldNational Institute of Allergy and Infectious Diseases, National Institutes of Health,Bethesda, Maryland, USA.
Ziv YanivNational Institute of Allergy and Infectious Diseases, National Institutes of Health,Bethesda, Maryland, USA.ORCID 0000-0003-0315-7727
Alina GrinevNational Institute of Allergy and Infectious Diseases, National Institutes of Health,Bethesda, Maryland, USA.
Ava Y XuDepartment of Bioengineering and Therapeutic Sciences, University of California, SanFrancisco, San Francisco, California, USA.
Eunsol YangDepartment of Bioengineering and Therapeutic Sciences, University of California, SanFrancisco, San Francisco, California, USA.ORCID 0000-0003-2581-349X
Gustavo E VelásquezUCSF Center for Tuberculosis, University of California, SanFrancisco, San Francisco, California, USA.ORCID 0000-0003-1438-0692
Linda HarrisonCenter for Biostatistics in AIDS Research, Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.ORCID 0000-0002-3170-0865
Alex RosenthalNational Institute of Allergy and Infectious Diseases, National Institutes of Health,Bethesda, Maryland, USA.ORCID 0000-0003-4190-9045
Radojka M SavicDepartment of Bioengineering and Therapeutic Sciences, University of California, SanFrancisco, San Francisco, California, USA.
Karen R JacobsonSection of Infectious Diseases, Boston University School of Medicine,Boston, Massachusetts, USA.
Maha R FarhatDepartment of Biomedical Informatics, Harvard Medical School,Boston, Massachusetts, USA.ORCID 0000-0002-3871-5760

Funding

Statistical and Data Management Center (SDMC), AIDS Clinical Trials Group (ACTG)UM1AI068634 · NIAID · HARVARD UNIVERSITY D/B/A HARVARD SCHOOL OF PUBLIC HEALTH · PI Marlene Ann Cooper, Michael David Hughes · 2011 to 2026
$246.6M
Statistical and Data Management Center for the AIDS Clinical Trials GroupU01AI068634 · NIAID · HARVARD SCHOOL OF PUBLIC HEALTH · PI HUGHES, MICHAEL DAVID · 2006 to 2010
$71.9M
Investigating bacterial contributions to TB treatment response: a focus on in-host pathogen dynamicsR01AI155765 · NIAID · HARVARD MEDICAL SCHOOL · PI FARHAT, MAHA · 2020 to 2024
$3.7M
BCBB Support Services 75N93022F00001BCBB Support Services HHSN316201300006WBusiness and Science Data Analytics HHSN316201200018WDeloitte Consulting LLPNational Institute of Allergy and Infectious DiseasesNIAID NIH HHS R01 AI155765NIAID NIH HHS U01 AI068634NIAID NIH HHS UM1 AI068634NIH HHS AI068634NIH HHS R01AI155765
6 · The paper itself

Abstract

backgroundChest X-ray (CXR) can assess pulmonary tuberculosis (TB) severity and may guide duration of treatment. However, the optimal radiological metric and its integration with clinical variables for predicting treatment outcomes remains unclear.

methodsWe used logistic regression to associate human-read and commercial artificial intelligence-generated CXR metrics with unfavorable outcome in the TB Portals real-world dataset (n = 2809). We assessed the standalone predictive accuracy for each of 10 radiological features for unfavorable outcomes, and combined the best-performing features with other clinical data. We fine-tuned ensembles of convolutional neural nets (CNNs) to automate human-read percent of lung involved (PLI) measurement directly from CXR images (n = 5261).

resultsHuman-read PLI is the only CXR finding associated with outcome across drug resistance and human immunodeficiency virus (HIV) subgroups and is optimally combined with age, sex, and smear grade for predicting treatment outcome. PLI predicts outcomes better than cavitation (area under the curve [AUC], 0.654 vs 0.581, respectively), performs better than all tested Qure.ai automated features (qXR v2), and improves outcome prediction when added to sex + age + smear grade (ΔAUC, 0.028 [95% confidence interval, .007-.042]). The CNN ensemble for predicting PLI >25% achieves an AUC of 0.850.

conclusionsPLI performs better than cavitation as a radiological marker for predicting TB treatment outcome, and improves risk stratification when combined with key clinical variables. Automation of PLI can be predicted using CNNs to enable scalability and accurate assessment.

Indexed as

Artificial IntelligenceTuberculosis, PulmonaryAdultConvolutional Neural NetworksFemaleHumansLogistic ModelsLungMaleMiddle AgedRadiography, ThoracicSeverity of Illness IndexTreatment Outcomeartificial intelligencepercent of lung involved in diseasetuberculosis outcome prediction

Identifiers

PMID41989328
PMCPMC13584190

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.