Evidence map›Paper›PMID 42006148›Full record

ArticleHuman mutation2026

A Combined Transcriptomic and Machine Learning Study Reveals PAX8 as a Promising Diagnostic Biomarker in Endometriosis.

Xiaoli Zhu, Li Zhong, Yanlin Xu, Yuanxia Zou, Manyun Liu, Xiaoqian Tong

Abstract read
In one paragraph

Article in Human mutation, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xiaoli ZhuDepartment of Gynaecology and Obstetrics, Yingtan 184 Hospital, China RongTong Medical Healthcare Group Co. Ltd., Yingtan, Jiangxi, China.
Li ZhongDepartment of Gynaecology and Obstetrics, Shangrao People's Hospital, Shangrao, Jiangxi, China.
Yanlin XuDepartment of Gynaecology and Obstetrics, Yingtan 184 Hospital, China RongTong Medical Healthcare Group Co. Ltd., Yingtan, Jiangxi, China.
Yuanxia ZouDepartment of Gynaecology and Obstetrics, Yingtan 184 Hospital, China RongTong Medical Healthcare Group Co. Ltd., Yingtan, Jiangxi, China.
Manyun LiuDepartment of Obstetrics and Gynecology, The First Affiliated Hospital of Changsha Medical University, Changsha, Hunan, China.
Xiaoqian TongDepartment of Gynaecology and Obstetrics, Yingtan 184 Hospital, China RongTong Medical Healthcare Group Co. Ltd., Yingtan, Jiangxi, China.ORCID https://orcid.org/0009-0004-8774-0884

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Endometriosis (EM) is a chronic, estrogen-dependent disease that lacks reliable noninvasive diagnostic biomarkers. This study was aimed at evaluating the diagnostic value of PAX8 using integrated transcriptomic and machine learning analyses. Methods: Transcriptomic data from the GSE141549 dataset were analyzed to identify differentially expressed genes (DEGs). Weighted gene coexpression network analysis (WGCNA), immune infiltration profiling, and functional enrichment (GO, KEGG, and GSEA) were conducted. Random forest (RF), support vector machine (SVM), and logistic regression (LR) models were trained and validated through five-fold cross-validation. Results: A total of 887 DEGs were identified, among which PAX8 was significantly downregulated in ectopic tissues and identified as a key diagnostic feature by both RF and WGCNA. GSEA revealed that PAX8-related gene sets were enriched in biological processes such as cilium organization and wound healing, and KEGG analysis indicated involvement in calcium signaling, JAK-STAT signaling, and focal adhesion pathways. Immune infiltration analysis further supported an immunomodulatory role of PAX8.

Indexed as

BiomarkersEndometriosisMachine LearningPAX8 Transcription FactorTranscriptomeComputational BiologyFemaleGene Expression ProfilingGene Expression RegulationGene Regulatory NetworksHumansRandom ForestSupport Vector MachineBiomarkersPAX8 protein, humanPAX8 Transcription Factorbiomarkerendometriosismachine learning

Identifiers

PMID42006148
PMCPMC13087501

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.