Evidence map›Paper›PMID 42030380›Full record

ArticleScience advances2026

Slow RNAPII elongation enhances naive pluripotency rewiring while maintaining high replication fork speed.

Sara Martín-Vírgala, Joana Segura, Alicia Gallego, Ran Tong, Sara Tur-Gracia, Jesús Rafael Rodriguez-Aguilera, Biswajit Das, Javier Isoler-Alcaraz, Carlos Gallego-García, Shraddha Shinde and 4 more

Abstract read
In one paragraph

Article in Science advances, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Sara Martín-VírgalaCentro de Biología Molecular Severo Ochoa (CBM), Consejo Superior de Investigaciones Científicas/Universidad Autónoma de Madrid (CSIC/UAM), C/ Nicolás Cabrera 1, 28049 Madrid. Spain.ORCID 0000-0002-7980-8883
Joana SeguraCentro de Biología Molecular Severo Ochoa (CBM), Consejo Superior de Investigaciones Científicas/Universidad Autónoma de Madrid (CSIC/UAM), C/ Nicolás Cabrera 1, 28049 Madrid. Spain.ORCID 0000-0002-2170-2701
Alicia GallegoCentro de Biología Molecular Severo Ochoa (CBM), Consejo Superior de Investigaciones Científicas/Universidad Autónoma de Madrid (CSIC/UAM), C/ Nicolás Cabrera 1, 28049 Madrid. Spain.ORCID 0000-0002-2936-7311
Ran TongCentro de Biología Molecular Severo Ochoa (CBM), Consejo Superior de Investigaciones Científicas/Universidad Autónoma de Madrid (CSIC/UAM), C/ Nicolás Cabrera 1, 28049 Madrid. Spain.ORCID 0000-0001-5240-7417
Sara Tur-GraciaCentro de Biología Molecular Severo Ochoa (CBM), Consejo Superior de Investigaciones Científicas/Universidad Autónoma de Madrid (CSIC/UAM), C/ Nicolás Cabrera 1, 28049 Madrid. Spain.ORCID 0000-0003-2262-0430
Jesús Rafael Rodriguez-AguileraCentro de Biología Molecular Severo Ochoa (CBM), Consejo Superior de Investigaciones Científicas/Universidad Autónoma de Madrid (CSIC/UAM), C/ Nicolás Cabrera 1, 28049 Madrid. Spain.ORCID 0000-0003-1474-6826
Biswajit DasDept. of Medical Biochemistry and Biophysics, Umeå University, SE 901 87 Umeå, Sweden.ORCID 0000-0002-5657-5626
Javier Isoler-AlcarazCentro de Biología Molecular Severo Ochoa (CBM), Consejo Superior de Investigaciones Científicas/Universidad Autónoma de Madrid (CSIC/UAM), C/ Nicolás Cabrera 1, 28049 Madrid. Spain.ORCID 0000-0002-7400-9679
Carlos Gallego-GarcíaCentro de Biología Molecular Severo Ochoa (CBM), Consejo Superior de Investigaciones Científicas/Universidad Autónoma de Madrid (CSIC/UAM), C/ Nicolás Cabrera 1, 28049 Madrid. Spain.ORCID 0000-0002-2766-3811
Shraddha ShindeMalopolska Centre of Biotechnology, Jagiellonian University, Krakow, Poland.
Magdalena M MaslonMalopolska Centre of Biotechnology, Jagiellonian University, Krakow, Poland.
Andrei ChabesDept. of Medical Biochemistry and Biophysics, Umeå University, SE 901 87 Umeå, Sweden.ORCID 0000-0003-1708-8259
Lothar SchermellehDepartment of Biochemistry, University of Oxford, South Parks Road, Oxford OX1 3QU, UK.ORCID 0000-0002-1612-9699
María GómezCentro de Biología Molecular Severo Ochoa (CBM), Consejo Superior de Investigaciones Científicas/Universidad Autónoma de Madrid (CSIC/UAM), C/ Nicolás Cabrera 1, 28049 Madrid. Spain.ORCID 0000-0002-3266-7999

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA replication and transcription must be intricately coordinated as both machineries navigate the same chromatin landscape to ensure genome stability and proper cell function. Here, we show that altering their elongation rates-specifically, slowed transcriptional elongation alongside rapid replication fork progression-does not elicit replicative stress. Instead, this independent kinetic variation accelerates the acquisition of naive pluripotency during in vitro dedifferentiation, revealing an unexpected link between transcription kinetics and cell plasticity. Mechanistically, we show that the transition to naive pluripotency is accompanied by a distinctive alternative splicing program indicative of reduced RNA polymerase II (RNAPII) elongation. These findings redefine the functional relationship between replication and transcription dynamics and uncover transcriptional velocity as a tunable layer of control over cellular identity transitions.

Indexed as

DNA ReplicationPluripotent Stem CellsRNA Polymerase IITranscription Elongation, GeneticAlternative SplicingAnimalsCell DedifferentiationCell DifferentiationKineticsMiceTranscription, GeneticRNA Polymerase II

Identifiers

PMID42030380
PMCPMC13108533

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.