Evidence map›Paper›PMID 42082503›Full record

ArticleScientific data2026

A compendium of horizontal gene transfers in Metazoa.

Johnathan A Spaulding, Janna L Fierst

Abstract readDataset
In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors.

Johnathan A SpauldingBiomolecular Sciences Institute and Department of Biological Sciences, Florida International University, 11200 8th Street, 33199, Miami, FL, USA. jspau006@fiu.edu.
Janna L FierstBiomolecular Sciences Institute and Department of Biological Sciences, Florida International University, 11200 8th Street, 33199, Miami, FL, USA. jfierst@fiu.edu.

Funding

Structural variants and the locus of evolutionR35GM147245 · NIGMS · FLORIDA INTERNATIONAL UNIVERSITY · PI Janna Lynn Fierst · 2022 to 2026
$1.8M
National Science Foundation 2225796NIGMS NIH HHS R35 GM147245NIGMS NIH HHS R35GM147245
6 · The paper itself

Abstract

With more eukaryotic genomes available for study researchers have been able to identify a growing number of horizontal gene transfer (HGT) candidates. We compiled 9,495 protein coding genes that were identified as horizontally transferred to metazoan hosts in the published literature. This dataset contains gene transfers from bacteria, fungi, archaea and protists to metazoans. We assigned a confidence score to each gene based on the methods used in the scientific paper reporting HGT. All the coding sequences and protein sequences for the HGT genes are stored in a fig share repository. This dataset can be used to identify trends in genome and protein evolution and provide a foundation for creating a centralized HGT database for eukaryotes.

Indexed as

Gene Transfer, HorizontalAnimalsArchaeaEukaryota

Identifiers

PMID42082503
PMCPMC13342648

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.