Evidence map›Paper›PMID 42086308›Full record

ArticleRNA (New York, N.Y.)2026

RNA•DNA:DNA triplex formation by

Nina M Krause, Julia Wirmer-Bartoschek, Christian Richter, Matthias S Leisegang, Ralf P Brandes, Harald Schwalbe

Abstract read
In one paragraph

Article in RNA (New York, N.Y.), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Nina M KrauseCenter for Biomolecular Magnetic Resonance (BMRZ), Institute for Organic Chemistry and Chemical Biology, Johann Wolfgang Goethe University, Frankfurt am Main 60438, Germany.
Julia Wirmer-BartoschekCenter for Biomolecular Magnetic Resonance (BMRZ), Institute for Organic Chemistry and Chemical Biology, Johann Wolfgang Goethe University, Frankfurt am Main 60438, Germany.ORCID http://orcid.org/0000-0002-0642-1311
Christian RichterCenter for Biomolecular Magnetic Resonance (BMRZ), Institute for Organic Chemistry and Chemical Biology, Johann Wolfgang Goethe University, Frankfurt am Main 60438, Germany.
Matthias S LeisegangInstitute for Cardiovascular Physiology, Johann Wolfgang Goethe University, German Centre of Cardiovascular Research (DZHK), Partner site Rhine-Main, Frankfurt, Hesse 60596, Germany.ORCID http://orcid.org/0000-0002-6084-6484
Ralf P BrandesInstitute for Cardiovascular Physiology, Johann Wolfgang Goethe University, German Centre of Cardiovascular Research (DZHK), Partner site Rhine-Main, Frankfurt, Hesse 60596, Germany.ORCID http://orcid.org/0000-0002-8035-0048
Harald SchwalbeCenter for Biomolecular Magnetic Resonance (BMRZ), Institute for Organic Chemistry and Chemical Biology, Johann Wolfgang Goethe University, Frankfurt am Main 60438, Germany schwalbe@nmr.uni-frankfurt.de.ORCID http://orcid.org/0000-0001-5693-7909

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Long noncoding RNAs (lncRNAs) play key roles in gene regulation. One potential regulation mechanism involves the formation of RNA•DNA:DNA triplexes. In these triplexes, the lncRNA binds in the major groove of a target DNA via Hoogsteen base pair formation. Here, we investigated the impact of the underlying RNA binding on the stability of the DNA duplex target to gain insights into the triplex stability at base pair resolution with an isolated triplex system. Quantification of the temperature-dependent exchange of imino hydrogen atoms with solvent of the target DNA duplex allows determination of the changes in the stability of individual DNA duplex base pairs upon triplex formation. The data shown here investigates an antiparallel triplex, formed between the lncRNA hypoxia-inducible factor 1-α antisense RNA 1 (

Indexed as

AdrenomedullinDNARNA, Long NoncodingBase PairingHumansHydrogen BondingNucleic Acid ConformationThermodynamicsAdrenomedullinDNARNA, Long Noncodingtriplex DNAbase pair stabilitiesNMR spectroscopyRNA•DNA:DNA triplex

Identifiers

PMID42086308
PMCPMC13374514

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.