Evidence map›Paper›PMID 42095878›Full record

ArticlePlant cell reports2026

Genome-wide analysis of sunflower (Helianthus annuus) and Orobanche cumana reveals HaEXLA2 and HaEXLB2 as negative regulators of lignin-based resistance.

Lei Shen, Yi Duan, Ying Li, Wenya Zhang, Yan Fu, Ting Zhou, Hongju Sun, Ahsan Ayyaz, Ling Xu

Abstract read
PubMed Publisher
In one paragraph

Article in Plant cell reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Functional Analysis ofPlants (Basel, Switzerland) · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Lei Shen *College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310018, China.
Yi Duan *College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310018, China.
Ying LiCollege of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310018, China.
Wenya ZhangCollege of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310018, China.
Yan FuCollege of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310018, China.
Ting ZhouCollege of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310018, China.
Hongju SunSchool of Life Sciences, Inner Mongolia University, Hohhot, 010020, China.
Ahsan AyyazCollege of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310018, China. ahsanayaz@zstu.edu.cn.
Ling XuCollege of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310018, China. lxu@zstu.edu.cn.

Funding

National Natural Science Foundation of China 32372566Natural Science Foundation of Inner Mongolia Autonomous Region 2025MS03134
6 · The paper itself

Abstract

key messageHaEXLA2 and HaEXLB2 enhance drought tolerance but suppress lignin defense, increasing broomrape susceptibility, revealing a trade-off in sunflowers. Expansins modulate cell wall dynamics to mediate plant stress responses. This study presents the first genome-wide analysis of the expansin gene-family in the sunflower (Helianthus annuus) and sunflower broomrape (Orobanche cumana) pathosystem, identifying 51 HaEXP and 23 OcEXP genes. Phylogenetic classification placed them into four canonical subfamilies: expansin A (EXPA), expansin B (EXPB), expansin-like A (EXLA), and expansin-like B (EXLB). The family's expansion was primarily driven by tandem duplication events under strong purifying selection. Promoter cis-element analysis revealed a high abundance of stress-responsive elements, predicting roles in ABA, JA, and hypoxia signaling. RNA-seq and RT-qPCR validation demonstrated that HaEXLA2 and HaEXLB2 were distinctly upregulated in resistant sunflowers during early O. cumana parasitization. Contrary to expectations, functional characterization revealed that their transient overexpression suppressed the phenylpropanoid pathway, downregulating key lignin biosynthetic genes (PAL1, 4CL2, COMT, and CAD1) and reducing lignin accumulation. This suppression of lignin-based defense significantly increased the susceptibility of otherwise resistant sunflower cultivars to broomrape. In parallel, heterologous expression of HaEXLA2 and HaEXLB2 in yeast enhanced drought tolerance by modulating cell wall properties. Our findings reveal a critical trade-off: HaEXLA2 and HaEXLB2 enhance abiotic stress adaptation while simultaneously suppressing lignin-based biotic defense against a root parasite. This dual functionality suggests them as potential targets for engineering stress resilience, though their negative impact on parasite resistance must be addressed in applied breeding programs.

Indexed as

HelianthusLigninOrobanchePlant ProteinsDrought ResistanceGene Expression Regulation, PlantPhylogenyStress, Physiologicalexpansin protein, plantLigninPlant ProteinsComparative genomicsDefense trade-offDrought toleranceExpansinHost-parasite interactionLignin biosynthesisSunflower

Identifiers

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.