Evidence map›Paper›PMID 42098147›Full record

ArticleScientific data2026

Chromosome-level genome assembly of the sand martin (Riparia riparia).

Miroslav Nuriddinov, Lyubov Malinovskaya, Aleksandr Bobrovskikh, Maria Gridina, Natalya A Serdyukova, Alexander Suh, Francisco J Ruiz-Ruano, Anna Torgasheva

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In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Miroslav NuriddinovSirius University of Science and Technology, Sirius Federal Territory, Sochi, Russia.
Lyubov MalinovskayaInstitute of Cytology and Genetics, Russian Academy of Sciences, Novosibirsk, Russia.
Aleksandr BobrovskikhInstitute of Cytology and Genetics, Russian Academy of Sciences, Novosibirsk, Russia.
Maria GridinaSirius University of Science and Technology, Sirius Federal Territory, Sochi, Russia.
Natalya A SerdyukovaInstitute of Molecular and Cellular Biology, Russian Academy of Sciences, Novosibirsk, Russia.
Alexander SuhCentre for Molecular Biodiversity Research, Leibniz Institute for the Analysis of Biodiversity Change, Museum Koenig Bonn, Bonn, Germany.
Francisco J Ruiz-RuanoCentre for Molecular Biodiversity Research, Leibniz Institute for the Analysis of Biodiversity Change, Museum Koenig Bonn, Bonn, Germany.
Anna TorgashevaInstitute of Cytology and Genetics, Russian Academy of Sciences, Novosibirsk, Russia. a.torgasheva@leibniz-lib.de.ORCID http://orcid.org/0000-0002-8933-8336

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The sand martin (Riparia riparia), a widely distributed migratory songbird, is a promising model for evolutionary and population genetics due to its unique life-history traits. It also provides a valuable system for studying germline-restricted chromosome (GRC) inheritance and evolution. However, the absence of a high-quality genomic resource has limited in-depth investigation of these phenomena. Here, we present a chromosome-level somatic genome assembly for a R. riparia male generated using PacBio HiFi long-read sequencing and Hi-C scaffolding. The pseudohaploid assembly spans 1.19 Gb across 40 chromosome models and shows high completeness (97.6% BUSCO score). Repetitive elements make up 20.2% of the assembled chromosomes. A total of 19,624 protein-coding genes were annotated by integrating transcriptome evidence, ab initio gene prediction, and homology-based approaches. This high-quality reference genome provides a valuable foundation for studying population structure, adaptation, and evolutionary history in R. riparia. It serves as a critical resource for future assembly and investigation of the GRC, and contributes to a broader understanding of genome evolution in birds.

Indexed as

ChromosomesGenomeSongbirdsAnimals

Identifiers

PMID42098147
PMCPMC13365828

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.