Evidence map›Paper›PMID 42098950›Full record

ArticleJournal of integrative plant biology2026

A group of TCP transcription factors is a missing link in strigolactone signaling.

Yi Huang, Lumei Bi, Yongshuang Huang, Jinlan Liu, Lin Wang, Fang Qiu, Yuehua Wang, Li Chen, Meng Zhang, Ruifeng Yao

Abstract read
In one paragraph

Article in Journal of integrative plant biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yi HuangState Key Laboratory of Chemo and Biosensing, Hunan Provincial Key Laboratory of Plant Functional Genomics and Developmental Regulation, College of Biology, Longping Agricultural College, Hunan University, Changsha, 410082, China.ORCID https://orcid.org/0000-0002-6444-2073
Lumei BiState Key Laboratory of Chemo and Biosensing, Hunan Provincial Key Laboratory of Plant Functional Genomics and Developmental Regulation, College of Biology, Longping Agricultural College, Hunan University, Changsha, 410082, China.ORCID https://orcid.org/0009-0006-2483-7819
Yongshuang HuangState Key Laboratory of Chemo and Biosensing, Hunan Provincial Key Laboratory of Plant Functional Genomics and Developmental Regulation, College of Biology, Longping Agricultural College, Hunan University, Changsha, 410082, China.ORCID https://orcid.org/0009-0002-3706-465X
Jinlan LiuState Key Laboratory of Chemo and Biosensing, Hunan Provincial Key Laboratory of Plant Functional Genomics and Developmental Regulation, College of Biology, Longping Agricultural College, Hunan University, Changsha, 410082, China.ORCID https://orcid.org/0009-0005-9954-7595
Lin WangState Key Laboratory of Chemo and Biosensing, Hunan Provincial Key Laboratory of Plant Functional Genomics and Developmental Regulation, College of Biology, Longping Agricultural College, Hunan University, Changsha, 410082, China.ORCID https://orcid.org/0009-0006-9977-1682
Fang QiuState Key Laboratory of Chemo and Biosensing, Hunan Provincial Key Laboratory of Plant Functional Genomics and Developmental Regulation, College of Biology, Longping Agricultural College, Hunan University, Changsha, 410082, China.ORCID https://orcid.org/0009-0009-3744-8494
Yuehua WangState Key Laboratory of Chemo and Biosensing, Hunan Provincial Key Laboratory of Plant Functional Genomics and Developmental Regulation, College of Biology, Longping Agricultural College, Hunan University, Changsha, 410082, China.ORCID https://orcid.org/0009-0007-0332-339X
Li ChenState Key Laboratory of Chemo and Biosensing, Hunan Provincial Key Laboratory of Plant Functional Genomics and Developmental Regulation, College of Biology, Longping Agricultural College, Hunan University, Changsha, 410082, China.ORCID https://orcid.org/0000-0002-1108-7645
Meng ZhangState Key Laboratory of Chemo and Biosensing, Hunan Provincial Key Laboratory of Plant Functional Genomics and Developmental Regulation, College of Biology, Longping Agricultural College, Hunan University, Changsha, 410082, China.ORCID https://orcid.org/0000-0003-0345-1301
Ruifeng YaoState Key Laboratory of Chemo and Biosensing, Hunan Provincial Key Laboratory of Plant Functional Genomics and Developmental Regulation, College of Biology, Longping Agricultural College, Hunan University, Changsha, 410082, China.ORCID https://orcid.org/0000-0002-0367-6423

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Strigolactones (SLs) are plant-specialized butenolide signaling molecules, recognized as endogenous plant hormones, that control plant development and environmental adaptation. In Arabidopsis (Arabidopsis thaliana), the repressor D53-like SMXLs regulate the expression of a vast number of genes in an EAR-motif-dependent manner to mediate SL signaling. However, it remains unclear how the SMXLs are recruited to specific genes and implement unique functions in vivo. Based on chromatin co-distribution analysis, we constructed a chromatin co-localization map of SMXL6 with 108 transcription factors. Among the candidate transcription factors, the Class II TEOSINTE BRANCHED1/CYCLOIDEA/PCF (TCP) family member TCP4 shows the highest frequency of chromatin co-localization with SMXL6. SMXL6 and TCP4 co‑localize at the promoter regions of 18 SL-induced SMXL6 target genes (SISGs), including BRC1. We confirmed that TCP4 interacts with SMXL6 and can bind directly to these co‑localized sites. The loss of CIN-TCPs function reduces the hormone responsiveness of the SL-induced genes. Introducing the tcp3/4/10 into SL‑deficient mutants restored the BRC1 expression to a level exceeding that of the wild type. However, the branching phenotype of the SL‑deficient mutant was only partially rescued, suggesting a limited role for BRC1 in SL‑mediated branching control and implicating the involvement of additional factors. An unexpected finding was that tcp3/4/10 rescued the dwarf phenotype of the SL‑deficient mutants, providing an opportunity to elucidate the mechanisms underlying SL‑regulated plant height. These findings demonstrate that TCP4 mediates SMXL6 chromatin recruitment during SL signaling, and provide a new understanding of how SMXL6 participates in SL signaling-mediated gene expression and plant development.

Indexed as

ArabidopsisArabidopsis ProteinsLactonesSignal TransductionTranscription FactorsChromatinGene Expression Regulation, PlantMutationPromoter Regions, GeneticArabidopsis ProteinsChromatinLactonesTranscription Factorsphytohormonesshoot branchingSMXLstrigolactonestranscription regulation

Identifiers

PMID42098950
PMCPMC13545852

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.