Evidence map›Paper›PMID 42135973›Full record

ArticleRenal failure2026

Identification of pyroptosis-related hub genes and immune cell infiltration in IgA nephropathy via bioinformatics analysis.

Jiayi Li, Cheng Zhou, Shunlai Shang, Qianqian Xu, Wenge Li

Abstract read
In one paragraph

Article in Renal failure, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jiayi LiDepartment of Nephrology, Peking University China-Japan Friendship School of Clinical Medicine, Beijing, China.
Cheng ZhouDepartment of Nephrology, China-Japan Friendship Hospital, Beijing, China.
Shunlai ShangDepartment of Nephrology, China-Japan Friendship Hospital, Beijing, China.
Qianqian XuDepartment of Nephrology, China-Japan Friendship Hospital, Beijing, China.
Wenge LiDepartment of Nephrology, Peking University China-Japan Friendship School of Clinical Medicine, Beijing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study aimed to identify pyroptosis-related hub genes and investigate immune cell infiltration in IgA nephropathy (IgAN) using bioinformatics and experimental validation. Gene expression data from the GEO database (GSE93798) were analyzed, and differential expression analysis was performed using the limma R package. LASSO regression and SVM algorithms were employed to select feature genes. A total of 19 pyroptosis-related differentially expressed genes (nine up-regulated and 10 down-regulated) were identified, with six hub genes (BHLHE40, JUN, CEBPB, ACE2, IL1B, and CD14) showing high diagnostic accuracy for discriminating IgAN from normal samples (AUC > 0.9). Gene Ontology (GO) and KEGG analyses revealed involvement in immune response, cell migration, and inflammation-related signaling pathways. Immune cell infiltration analysis showed higher levels of CD8+ T cells, macrophages, and neutrophils in IgAN. Validation using GSE99339 confirmed these findings, with the hub genes also demonstrating high AUC values in this independent dataset. The differential expression of these genes was validated in both human kidney tissues and serum samples. This study provides potential biomarkers and therapeutic targets for IgAN by elucidating pyroptosis-related genes and immune cell infiltration profiles.

Indexed as

Glomerulonephritis, IGAPyroptosisBiomarkersCD8-Positive T-LymphocytesComputational BiologyDatabases, GeneticGene Expression ProfilingGene OntologyHumansKidneyMacrophagesNeutrophilsBiomarkersbioinformaticshub genesIgA nephropathyimmune cell infiltrationpyroptosis

Identifiers

PMID42135973
PMCPMC13182180

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.