Evidence mapPaperPMID 42142182Full record

ArticleMolecular biology reports2026

Development and validation of a tetra-primer ARMS-PCR assay for genotyping the MTHFR (rs1801131) c.1286 A > C (p.Glu429Ala) polymorphism: a comparative study with KASP.

Amany Alqosaibi, Akram Husain Rehman Syed Rasheed, Huseyin Tombuloglu, Reham Altwayan, Abdulrahman Alhusil, Taghreed Awadh, Mehmet Ozdemir

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Article in Molecular biology reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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7 authors.

Amany AlqosaibiDepartment of Biology, College of Science, Imam Abdulrahman Bin Faisal University, Dammam, 31441, Saudi Arabia.
Akram Husain Rehman Syed RasheedInstitute for Research and Medical Consultations (IRMC), Imam Abdulrahman Bin Faisal University, Dammam, 31441, Saudi Arabia.
Huseyin TombulogluDepartment of Genetics Research, Institute for Research and Medical Consultations (IRMC), Imam Abdulrahman Bin Faisal University, Dammam, 31441, Saudi Arabia. htoglu@iau.edu.sa.
Reham AltwayanIndependent researcher, Dammam, Saudi Arabia.
Abdulrahman AlhusilDepartment of Internal Medicine, King Fahad Military Medical Complex, Dhahran, Saudi Arabia.
Taghreed AwadhDepartment of Internal Medicine, King Fahad Military Medical Complex, Dhahran, Saudi Arabia.
Mehmet OzdemirIndependent Researcher, St. Louis, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe tetra-primer amplification refractory mutation system (T-ARMS) PCR assay is a cost-effective and rapid method for SNP genotyping. The methylenetetrahydrofolate reductase (MTHFR) c.1286 A > C (rs1801131) polymorphism can influence MTHFR enzyme activity and homocysteine levels. While its independent clinical impact remains a subject of debate, it is frequently screened in thrombophilia panels, particularly in the context of compound heterozygosity. METHODS AND

resultsThis cross-sectional validation study aims to develop and validate a T-ARMS-PCR assay on the MTHFR c.1286 A > C mutation. The results were validated using the Kompetitive Allele-Specific PCR (KASP) as the reference method across 30 clinical DNA samples from a thrombophilia-susceptible cohort. The T-ARMS-PCR assay successfully distinguished genotypes with a clear electrophoretic separation and without non-specific amplification. The results exhibited 100% concordance with the KASP assay (95% CI: 88.4-100%; κ: 1.0). The total turnaround time including the reaction and electrophoretic separation was 107.5 min.

conclusionsT-ARMS-PCR offers a reliable, rapid, and cost-effective alternative for MTHFR c.1286 A > C genotyping. This method is particularly suitable for resource-limited clinical settings that require accurate genotyping without the need for high-end sequencing or specialized instrumentation.

Indexed as

Genotyping TechniquesMethylenetetrahydrofolate Reductase (NADPH2)Polymerase Chain ReactionAllelesCross-Sectional StudiesDNA PrimersGenotypeHumansPolymorphism, Single NucleotideThrombophiliaDNA PrimersMethylenetetrahydrofolate Reductase (NADPH2)MTHFR protein, humanAlleleClinical diagnosticsCost-effectiveMTHFRSNPT-ARMS-PCR

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.