Evidence map›Paper›PMID 42146341›Full record

ArticlebioRxiv : the preprint server for biology2026

Impact of Aii Amacrine Cell Rewiring in a Pathoconnectome-Based Computational Model of Early Retinal Degeneration.

Ege Iseri, Rebecca Pfeiffer, Crystal Sigulinsky, James Anderson, Jia-Hui Yang, Jeebika Dahal, Jessica Garcia, Jean-Marie C Bouteiller, Bryan W Jones, Gianluca Lazzi

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Ege IseriInstitute of Technology and Medical Systems, University of Southern California, Los Angeles, CA, USA.
Rebecca PfeifferDepartment of Ophthalmology, University of Pittsburgh, Pittsburgh, PA, USA.ORCID 0000-0002-4123-516X
Crystal SigulinskyDepartment of Ophthalmology, University of Pittsburgh, Pittsburgh, PA, USA.ORCID 0000-0002-5642-8474
James AndersonDepartment of Ophthalmology, University of Pittsburgh, Pittsburgh, PA, USA.
Jia-Hui YangDepartment of Ophthalmology, University of Pittsburgh, Pittsburgh, PA, USA.
Jeebika DahalSchool of Medicine, University of Utah, Salt Lake City, UT, USA.
Jessica GarciaSchool of Medicine, University of Utah, Salt Lake City, UT, USA.
Jean-Marie C BouteillerInstitute of Technology and Medical Systems, University of Southern California, Los Angeles, CA, USA.
Bryan W JonesDepartment of Ophthalmology, University of Pittsburgh, Pittsburgh, PA, USA.ORCID 0000-0001-5527-6643
Gianluca LazziInstitute of Technology and Medical Systems, University of Southern California, Los Angeles, CA, USA.

Funding

Virus Production and Manipulation of Protein/Gene Expression ModuleP30EY008098 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Yuanyuan Chen · 1989 to 2026
$17.8M
Retinal CircuitryR01EY028927 · NEI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Bryan William Jones · 2019 to 2026
$5.2M
Mesoscale correlative light-electron microscopy (CLEM) computational pathoconnectomes of degenerated retinasR01EY035527 · NEI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI GIANLUCA LAZZI · 2024 to 2026
$2.0M
NEI NIH HHS P30 EY008098NEI NIH HHS R01 EY028927NEI NIH HHS R01 EY035527
6 · The paper itself

Abstract

Retinitis pigmentosa (RP), a retinal degenerative disease, is characterized by progressive photoreceptor loss and ongoing remodeling and rewiring of the inner retina. This study investigates rod network rewiring through pathoconnectomic evaluation and its impacts on signaling patterns. The glycinergic Aii amacrine cell (Aii) plays a central role in the healthy retina bridging rod and cone pathways, enabling an increased dynamic range of vision. Pathoconnectomics reveals altered connectivity in both the excitatory drive and gap junctional coupling of Aiis in retinal degeneration. A computational model of the rewired network was developed to assess the functional consequences of these structural changes by simulating light-evoked responses and changes in excitatory postsynaptic potentials (EPSPs). The model predicts significant changes in bipolar and Aii EPSPs between active and baseline conditions, driven by newly formed gap junctions in the degenerate retina. Notably, the aberrant circuitry induces rhythmic firing of up to 10 Hz in retinal ganglion cells, consistent with network depolarization relative to the healthy baseline state. These findings align with patch-clamp observations in rd1 and rd10 mouse models of RP, suggesting that Aii-mediated network alterations may underlie early clinical symptoms, including impaired adaptation between photopic and scotopic vision. More broadly, this work demonstrates that integrating computational modeling with pathoconnectomics enables predictive analysis of signaling in early-stage retinal degeneration and may help identify windows for therapeutic intervention. Such models could be further extended with multi-scale bioelectromagnetic simulations to optimize neurostimulation strategies aimed at slowing disease progression.

Identifiers

PMID42146341
PMCPMC13174514

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.