Evidence map›Paper›PMID 42157695›Full record

ArticleEpilepsia2026

Low diagnostic yield of presurgical genetic testing in adult patients with epilepsy.

Clara Jünemann, Amanda Stuart, Navprabhjot Kaur, Samuel Wiebe, Nathalie Jette, Shaily Singh, Felippe Borlot, Susanne Knake, Calgary Comprehensive Epilepsy Program Collaborators, Ping Yee Billie Au and 1 more

Abstract read
In one paragraph

Article in Epilepsia, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Clara JünemannEpilepsy Center Hessen, Philipps-University, Marburg, Germany.ORCID https://orcid.org/0009-0005-9732-3205
Amanda StuartDepartment of Medical Genetics, Cumming School of Medicine, University of Calgary, Calgary, Alberta, Canada.ORCID https://orcid.org/0009-0008-9848-2613
Navprabhjot KaurDepartment of Clinical Neurosciences, University of Calgary, Calgary, Alberta, Canada.ORCID https://orcid.org/0009-0009-1033-0955
Samuel WiebeDepartment of Clinical Neurosciences, University of Calgary, Calgary, Alberta, Canada.ORCID https://orcid.org/0000-0002-1061-9099
Nathalie JetteDepartment of Clinical Neurosciences, University of Calgary, Calgary, Alberta, Canada.ORCID https://orcid.org/0000-0003-1351-5866
Shaily SinghDepartment of Clinical Neurosciences, University of Calgary, Calgary, Alberta, Canada.
Felippe BorlotDepartment of Clinical Neurosciences, University of Calgary, Calgary, Alberta, Canada.ORCID https://orcid.org/0000-0001-7897-4700
Susanne KnakeEpilepsy Center Hessen, Philipps-University, Marburg, Germany.ORCID https://orcid.org/0000-0002-6298-0513
Calgary Comprehensive Epilepsy Program Collaborators
Ping Yee Billie AuDepartment of Medical Genetics, Cumming School of Medicine, University of Calgary, Calgary, Alberta, Canada.ORCID https://orcid.org/0000-0002-9533-7217
Karl Martin KleinDepartment of Medical Genetics, Cumming School of Medicine, University of Calgary, Calgary, Alberta, Canada.ORCID https://orcid.org/0000-0002-6654-1665

Funding

Center for Common Disease GeneticsUM1HG008895 · NHGRI · BROAD INSTITUTE, INC. · PI DALY, MARK JOSEPH, GABRIEL, STACEY · 2016 to 2020
$111.2M
Powering whole genome sequence-based genetic discovery for common human diseases- Extended 2021-2022.U01HG009088 · NHGRI · HARVARD SCHOOL OF PUBLIC HEALTH · PI LIN, XIHONG, NEALE, BENJAMIN MICHAEL · 2016 to 2021
$5.1M
Clinical Research Fund, Cumming School of Medicine, University of Calgary.NHGRI NIH HHS U01 HG009088NHGRI NIH HHS UM1 HG008895
6 · The paper itself

Abstract

objectiveTo determine the diagnostic yield of genetic testing in patients undergoing presurgical evaluation for epilepsy.

methodsWe conducted a cohort study including 115 adult patients who underwent presurgical evaluation in the Calgary Epilepsy Program between 2019 and 2023 and who had undergone research exome sequencing. A curated epilepsy gene panel comprising 765 Online Mendelian Inheritance in Man (OMIM)-listed epilepsy-associated genes was applied. Variants were classified according to American College of Medical Genetics and Genomics guidelines and assessed for clinical relevance and association with postsurgical outcomes.

resultsPathogenic or likely pathogenic variants in DEPDC5, NPRL2, KCNT2, and PRRT2 were identified, respectively, in 4 individuals (3.5%, 4/115). All variants met stringent quality criteria with high pathogenicity scores (Combined Annotation Dependent Depletion (CADD) 34-37) and absent or extremely low population frequencies in gnomAD v4.1. None of these patients had intellectual disability, and only one patient (PRRT2) had a positive family history. The patient with the KCNT2 variant underwent epilepsy surgery with good outcome (Engel class ID). SIGNIFICANCE: This presurgical cohort demonstrates a low diagnostic yield of genetic testing in adult epilepsy surgery candidates. However, three of four patients with (likely) pathogenic variants did not have features that would have prompted clinical genetic testing, indicating that their genetic diagnosis would have been missed based on typical clinical genetic testing criteria in many jurisdictions.

Indexed as

EpilepsyGenetic TestingAdultCohort StudiesExome SequencingFemaleGTPase-Activating ProteinsHumansMaleMembrane ProteinsMiddle AgedNerve Tissue ProteinsPreoperative CareYoung AdultDEPDC5 protein, humanGTPase-Activating ProteinsMembrane ProteinsNerve Tissue ProteinsPRRT2 protein, humanepilepsyexome sequencinggenetic testingpresurgicalsurgery

Identifiers

PMID42157695
PMCPMC13525575

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.