Evidence mapPaperPMID 42201473Full record

ArticleDiscover oncology2026

VAV2-associated ncRNA network in the focal adhesion pathway is dysregulated in laryngeal squamous cell carcinoma.

Payam Mohammadi, Najmeh Parvaz, Fariba MehdiKhani, Mohammad Elahimanesh, Masoomeh Bakhshandeh, Keyvan Aghazadeh, Mohsen Aryan Tabar, Mohammad Shabani, Mohammad Najafi

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Article in Discover oncology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Payam MohammadiDepartment of Biochemistry, School of Medicine, Iran University of Medical Sciences, Tehran, Iran. payam1992mohammadi@gmail.com.
Najmeh ParvazDepartment of Biochemistry, School of Medicine, Iran University of Medical Sciences, Tehran, Iran.
Fariba MehdiKhaniClinical Biochemistry Department, Faculty of Medical Sciences, Tehran University of Medical Sciences, Tehran, Iran.
Mohammad ElahimaneshDepartment of Biochemistry, School of Medicine, Iran University of Medical Sciences, Tehran, Iran.
Masoomeh BakhshandehDepartment of Biochemistry, School of Medicine, Iran University of Medical Sciences, Tehran, Iran.
Keyvan AghazadehOtorhinolaryngology Research Center, Amir Alam Hospital, Tehran University of Medical Sciences, Tehran, Iran.
Mohsen Aryan TabarDepartment of Biochemistry, Faculty of Medicine, Baqiyatallah University of Medical Sciences, Tehran, Iran.
Mohammad ShabaniDepartment of Biochemistry, School of Medicine, Iran University of Medical Sciences, Tehran, Iran.
Mohammad NajafiDepartment of Biochemistry, School of Medicine, Iran University of Medical Sciences, Tehran, Iran. nbsmmsbn@iums.ac.ir.

Funding

Iran University of Medical Sciences 1402.460
6 · The paper itself

Abstract

backgroundThe focal adhesion is a key pathway for cellular proliferation and migration. This study aimed to elucidate the function of VAV2, a key guanine nucleotide exchange factor in the focal adhesion pathway, and to investigate its post-transcriptional relationships through the predicted VAV2/miRNA/lncRNA network in Laryngeal Squamous Cell Carcinoma (LSCC).

methodsRNA-seq data analysis from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) datasets was performed using R software. Differential expression profiles of mRNAs, miRNAs, and lncRNAs were integrated with multi-database miRNA-target predictions to construct a high-confidence VAV2-associated ncRNA network. The RT-qPCR and Western blotting techniques were used to validate the gene analysis in 63 paired LSCC and adjacent normal tissues.

resultsFocal adhesion was among the significantly enriched pathways (47 genes, P = 2.23 × 10⁻⁴). VAV2 exhibited consistent upregulation at both mRNA and protein levels in tumor tissues (P < 0.0001). Tumor samples exhibited the downregulation of miR-449b-5p and miR-495-3p, along with pronounced significant overexpression of LINC00665 and CCDC144NL-AS1 (P < 0.01). Significant positive correlations were identified between VAV2 and lncRNAs (r = 0.76 and r = 0.79, P < 0.0001), alongside comparable negative correlations with miRNAs.

conclusionOur results proposed that the predicted VAV2-associated ncRNA network might be involved in the focal adhesion pathway. These data suggested novel insights into the underlying mechanisms and hold promise as biomarkers and therapeutic targets.

Indexed as

CCDC144NL-AS1Focal adhesionGEOLaryngeal squamous cell carcinomaLINC00665MiR-449b-5pMiR-495-3pNetworkTCGAVAV2

Identifiers

PMID42201473
PMCPMC13391986

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.