Evidence map›Paper›PMID 42239747›Full record

ArticleResearch square2026

Alternative 3' Polyadenylation Responses to Acute Ethanol Exposure Differ Between Drosophila Populations.

George Boateng-Sarfo, Seungjae Lee, Eric Lai, Sarah Signor

Abstract readPreprint
In one paragraph

Article in Research square, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

George Boateng-SarfoNorth Dakota State University.
Seungjae LeeMemorial Sloan-Kettering Institute.
Eric LaiMemorial Sloan-Kettering Institute.
Sarah SignorNorth Dakota State University.ORCID 0000-0003-2401-0644

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Selective regulatory and biogenesis mechanisms for microRNAsR01GM083300 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI Eric C Lai · 2007 to 2026
$9.8M
Mechanism and regulation of Hu family RNA binding proteins during neural alternative polyadenylationR01NS083833 · NINDS · SLOAN-KETTERING INST CAN RESEARCH · PI LAI, ERIC C · 2014 to 2023
$5.4M
NCI NIH HHS P30 CA008748NIGMS NIH HHS R01 GM083300NINDS NIH HHS R01 NS083833
6 · The paper itself

Abstract

Alternative polyadenylation is a pervasive post-transcriptional mechanism that generates mRNA isoforms with distinct 3' untranslated regions (3' UTRs), which can influence transcript stability, localization and translation. Ethanol is an environmental stressor for Drosophila melanogaster, and natural populations show distinct responses to ethanol exposure, suggesting that the genetic background can modulate phenotypic response. Yet, how the natural genetic variation modulates ethanol-responsive APA remains understudied. We profiled 3' end isoforms following acute ethanol exposure in three French (cosmopolitan) and three Zambian (ancestral range) D. melanogaster genotypes and identified numerous significant APA events across all genotypes. Ethanol-induced APA was widespread but highly genotype - and population - dependent: the French genotypes showed an enrichment of proximal shifts (3' UTR shortening), while Zambian genotypes were biased toward distal shifts (3' UTR lengthening). Most of the ethanol-responsive APA events were private to a single population, with relatively few genes exhibiting conserved directional changes across both backgrounds. We also classify genes showing opposite-direction shifts between populations, and others with opposite-direction shifts between various classes of APA. For two-site events, inter-poly(A) site distance did not predict response direction; however, spacing strongly predicted the magnitude of remodeling, with larger separations enabling greater absolute 3' UTR length changes. Our findings support a model in which ethanol-responsive 3' end regulation is a flexible genetically contingent, and that population-specific APA remodeling represent a plausible molecular substrate contributing to adaptation.

Identifiers

PMID42239747
PMCPMC13228862

What Socratic holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.