ArticleBMC genomic data2026
Complete genome sequence of Streptococcus lingualis isolated from subgingival biofilm.
Article in BMC genomic data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Authors and funding
7 authors.
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Abstract
objectiveStreptococcus lingualis is a recently described oral streptococcal species; however, genomic information for this species remains limited, with only a single complete genome currently available for the type strain S5ᵀ. The objective of this study was to generate a high-quality complete genome sequence of a subgingival biofilm-derived S. lingualis isolate and expand the genomic resources available for this species. DATA DESCRIPTION: The S. lingualis strain KHUD_012 was isolated from subgingival biofilm of a healthy adult and sequenced using the PacBio Sequel IIe platform. A single SMRT cell produced 144,821 HiFi reads, which were assembled de novo using the IPA HiFi genome assembler v2.0. The complete genome consists of a single circular chromosome of 2,115,610 bp with a G + C content of 42.0%, encoding 1,956 protein-coding genes, four rRNA operons, and 62 tRNAs. BUSCO analysis indicated 99.5% completeness. Pairwise whole-genome comparisons with closely related type strains showed that KHUD_012 was most closely related to S. lingualis S5ᵀ, with an OrthoANI value of 96.44%, and Parsnp-based core-genome SNP analysis supported this phylogenetic placement. Comparative genomic analysis with S5ᵀ identified 1,717 shared core gene clusters and 198 unique gene clusters in KHUD_012, many of which were functionally uncharacterized.
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