Evidence map›Paper›PMID 42275374›Full record

ArticlePloS one2026

Understanding mechanistic responses underlying diurnal photoprotection and photosynthetic plasticity among cacao genotypes under natural amazonian field conditions.

Juan Carlos Suárez, José Iván Vanegas, Fabricio Eulalio Leite Carvalho

Abstract read
In one paragraph

Article in PloS one, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Juan Carlos SuárezPrograma de Ingeniería Agroecológica, Facultad de Ingeniería, Universidad de la Amazonia, Florencia, Colombia.ORCID https://orcid.org/0000-0001-5928-1837
José Iván VanegasPrograma de Ingeniería Agroecológica, Facultad de Ingeniería, Universidad de la Amazonia, Florencia, Colombia.ORCID https://orcid.org/0000-0001-9819-375X
Fabricio Eulalio Leite CarvalhoCorporación Colombiana de Investigación Agropecuaria (Agrosavia), Centro de Investigación La Suiza, Rionegro, Colombia.ORCID https://orcid.org/0000-0001-7815-0082

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cacao (Theobroma cacao) is a key tree species for chocolate production and a vital income source for millions, especially in Africa and South America. In the Amazon, physiological studies on cocoa have focused on abiotic factors, but the comparison of clones in these environments is still in its infancy.This study examined the physiological responses of cacao clones to the typical diurnal conditions of the Colombian Amazon. We measured environmental, plant health, and chlorophyll fluorescence variables in 18 cacao clones using MultispeQ and Imaging-PAM throughout the day; we estimated Fv/Fm, ΦII, ETR, and NPQt, calculated SLA, and quantified photosynthetic pigments. Significant phenotypic differences were identified in photosynthetic efficiency and morphology. High specific leaf area (SLA), linked to efficient energy capture and reduced transpiration, was observed in LUKER-40 and FGH-4. Chlorophyll a fluorescence approach, revealed differences in photochemical efficiency (Fv/Fm) and excess energy dissipation. Genotypes like FGH-4, FSV-41, and IMC-67 showed high Fv/Fm and electron transport rates (ETR) (p < 0.05) under heat stress, indicating strong PSII functionality. Conversely, ICS-95 relied on non-photochemical quenching (NPQt) for heat dissipation. LUKER-50, with high carotenoid content, demonstrated resilience to oxidative stress. Variations in chlorophyll content affected light capture efficiency, with ICS-60 excelling in photosynthesis under high temperatures and excess light at noon. Leaf temperature regulation emerged as critical, with genotypes like LUKER-40 maintaining cooler leaves to avoid potential thermal damage. These traits highlight the acclimation of genotypes to high light and heat in the Colombian Amazon, with LUKER-50, ICS-95, FLE-3, and LUKER-40 identified as promising candidates for agroforestry in this region.

Indexed as

CacaoCircadian RhythmPhotosynthesisChlorophyllElectron TransportFluorescenceGenotypePlant LeavesChlorophyll

Identifiers

PMID42275374
PMCPMC13257972

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.