Evidence map›Paper›PMID 42310306›Full record

ArticleNature communications2026

Phospholipid-independent biogenesis and function of the RP4 conjugation pilus.

Naito Ishimoto, Shan He, Mikhail Bogdanov, Terry K Smith, Gad Frankel, Konstantinos Beis

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Naito Ishimoto *Department of Life Sciences, Imperial College London, London, UK.ORCID 0000-0001-8976-8582
Shan He *Department of Life Sciences, Imperial College London, London, UK.ORCID 0009-0001-0452-9417
Mikhail BogdanovDepartment of Biochemistry & Molecular Biology, University of Texas-Houston, McGovern Medical School, Fannin, USA.ORCID 0000-0002-7176-8127
Terry K SmithBSRC, Schools of Biology and Chemistry, University of St Andrews, St Andrews, UK.ORCID 0000-0003-1994-2009
Gad FrankelDepartment of Life Sciences, Imperial College London, London, UK. g.frankel@imperial.ac.uk.ORCID 0000-0002-0046-1363
Konstantinos BeisDepartment of Life Sciences, Imperial College London, London, UK. kbeis@imperial.ac.uk.ORCID 0000-0001-5727-4721

Funding

BBSRC BB/X019284/1NIH HHS R01GM121493-6
6 · The paper itself

Abstract

Bacterial conjugation, the process of horizontal gene transfer between bacteria, is initiated by mating pair formation (MPF) via a conjugative pilus. Conjugation of the IncP RP4 plasmid is mediated by short mating pili. Here, we report the cryo-EM structure of the RP4 pilus at 2.74 Å resolution. Uniquely, both the structural and quantitative mass spectral analyses revealed that the cyclic TrbC pilin subunit is not lipidated. Consistently, an E. coli pgsA mutant lacking phosphatidylglycerol (PG) can serve as a donor of RP4 but not of F- (pKpQIL), H- (R27) or W- (R388) pili, whose biogenesis and DNA transfer is PG-dependent. RP4 is the first example of a lipid-independent functional mating pilus. This discovery suggests that an amphipathic lipid moiety is not universally essential for the biogenesis of conjugative pili and MPF, providing an alternative model for their assembly and function. These data expand our understanding of the diverse bacterial mechanisms employ to transfer genetic material.

Indexed as

Conjugation, GeneticEscherichia coliFimbriae, BacterialPhospholipidsCryoelectron MicroscopyEscherichia coli ProteinsFimbriae ProteinsPhosphatidylglycerolsPlasmidsEscherichia coli ProteinsFimbriae ProteinsPhosphatidylglycerolsPhospholipids

Identifiers

PMID42310306
PMCPMC13434634

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.