Evidence mapPaperPMID 42321549Full record

ReviewThe EMBO journal2026

The identity crisis of cryptic lncRNAs: when non-coding RNAs translate into small peptides.

Leoš Shivaya Valášek, Filip Brázdovič, Filip Trčka, Mahabub Pasha Mohammad, Adriana Roithová

Abstract readReview
In one paragraph

Review in The EMBO journal, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Leoš Shivaya ValášekLaboratory of Regulation of Gene Expression, Institute of Microbiology of the Czech Academy of Sciences, Prague, Videnska, 1083, 142 20, Czech Republic. valasekl@biomed.cas.cz.ORCID http://orcid.org/0000-0001-8123-8667
Filip BrázdovičLaboratory of Regulation of Gene Expression, Institute of Microbiology of the Czech Academy of Sciences, Prague, Videnska, 1083, 142 20, Czech Republic.
Filip TrčkaLaboratory of Regulation of Gene Expression, Institute of Microbiology of the Czech Academy of Sciences, Prague, Videnska, 1083, 142 20, Czech Republic.ORCID http://orcid.org/0000-0001-6307-8129
Mahabub Pasha MohammadLaboratory of Regulation of Gene Expression, Institute of Microbiology of the Czech Academy of Sciences, Prague, Videnska, 1083, 142 20, Czech Republic.
Adriana RoithováLaboratory of Regulation of Gene Expression, Institute of Microbiology of the Czech Academy of Sciences, Prague, Videnska, 1083, 142 20, Czech Republic.

Funding

Akademie Věd České Republiky (CAS) Praemium AcademiaeEC | Horizon Europe | Excellent Science | HORIZON EUROPE Marie Sklodowska-Curie Actions (MSCA) CZ.02.01.01/00/22_010/0008767Grantová Agentura České Republiky (GAČR) 24-10013SMinisterstvo Školství, Mládeže a Tělovýchovy (MŠMT) CZ.02.01.01/00/22_008/0004575
6 · The paper itself

Abstract

From a historical perspective, long non-coding RNAs (lncRNAs) represent a relatively short story. However, this story has many plot lines, thrills, twists, and turns that altogether form quite a long saga of its own. lncRNAs stay at the forefront of a recent paradigm shift from a protein-only world to the mysterious RNA world, the enormous complexity of which we are only beginning to appreciate. Here, we review the most enigmatic aspect of lncRNAs, their coding ability in the context of whole-cell regulation. What peptides do lncRNAs encode as true translons? What is the mechanism of their translation? What roles do these ncRNA-encoded peptides (ncPEPs) play during differentiation and development and in distinct pathologies? Do these ncPEPs contribute to the already known regulatory roles of lncRNAs? Shouldn't we coin the coding subset of lncRNAs its apt name: cryptic long non-coding RNAs (crpt-lncRNAs) for their cryptic coding capacity? These and other questions concerning these current winners of the spotlight in molecular biology, which await resolution, are discussed so that molecular history can be rewritten once again.

Indexed as

PeptidesProtein BiosynthesisRNA, Long NoncodingAnimalsHumansMicropeptidesMicropeptidesPeptidesRNA, Long Noncoding

Identifiers

PMID42321549
PMCPMC13434451

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.