Evidence map›Paper›PMID 42321944›Full record

ArticleCell & bioscience2026

Unveiling a unique microglial phenotype promoting oxidation in the iBRB: insights from single-cell transcriptomics in the NPDR rat model.

Yifei Geng, Yunqi Zhang, Xiaoyu Xu, Yixin Wang, Yun Luo, Xiaobo Sun

Abstract read
In one paragraph

Article in Cell & bioscience, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yifei GengInstitute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, No. 151, Malianwa North Road, Haidian District, Beijing, 100193, PR China.
Yunqi ZhangInstitute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, No. 151, Malianwa North Road, Haidian District, Beijing, 100193, PR China.
Xiaoyu XuInstitute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, No. 151, Malianwa North Road, Haidian District, Beijing, 100193, PR China.
Yixin WangInstitute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, No. 151, Malianwa North Road, Haidian District, Beijing, 100193, PR China.
Yun LuoInstitute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, No. 151, Malianwa North Road, Haidian District, Beijing, 100193, PR China. ly20040423@126.com.
Xiaobo SunInstitute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, No. 151, Malianwa North Road, Haidian District, Beijing, 100193, PR China. sun_xiaobo163@163.com.ORCID http://orcid.org/0000-0003-4745-1709

Funding

Beijing Nova Program 20230484482CAMS Innovation Fund for Medical Sciences No. 2022-I2M-2-002Innovative Research Group Project of the National Natural Science Foundation of China Grant nos. 82174034
6 · The paper itself

Abstract

backgroundEarly diagnosis and targeted treatment of inner blood-retinal barrier (iBRB) impairment in non-proliferative diabetic retinopathy (NPDR) present significant challenges. This study investigates the cellular heterogeneity and early lesions in the iBRB microenvironment.

methodsWe created a single-cell transcriptional atlas of NPDR using retinas from Zucker Diabetic Fatty rats, focusing on the expression of cells within the iBRB microenvironment, particularly microglia. We performed cell-cell gene interaction analyses to investigate intercellular communications among different cell types in the iBRB. Additionally, we conducted differentiation potential and trajectory analysis, transcription factor regulatory network characterization, and enrichment analysis of microglia. We also employed transmission electron microscopy, immunofluorescence, and histological analysis to validate the hypothesis.

resultsBased on retinal samples from NPDR rats which had retinal edema and kidney damage, and normal rats, we selected 36,821 cells for subsequent analysis using single-cell sequencing. We identified 669 cells in iBRB and microglia had the highest connectivity value by enrichment analysis. 980 differentially expressed genes related to microglia divide it into 4 subtypes. Among them, Spp1 highly expressed microglia subtype 2 had the highest differentiation potential and was significantly upregulated after NPDR lesions. By integrating histological and biochemical analysis results, the roles of the subtype in the differentiation of microglia in the iBRB microenvironment, such as oxidative stress and apoptosis, were well validated.

conclusionThis study identified a novel microglia type in NPDR rats, offering valuable insight into targeted therapeutic strategies for NPDR patients and enhancing our understanding of microglial regulation within the iBRB.

Indexed as

Inner blood-retina barrierMicrogliaNon-proliferative diabetic retinopathyOxidationSingle-cell RNA sequencing

Identifiers

PMID42321944
PMCPMC13523196

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.